SILENT_MODE
BLOCK_FILE jp_X0go7Ke.concise.blc
MAX_NSEQ 912
MAX_INPUT_LEN 914
OUTPUT_FILE jp_X0go7Ke.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 70 901   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 902 70 911 H SPACE
SUB_CHARS 1 902 70 911 E SPACE
SUB_CHARS 1 902 70 911 - SPACE
STRAND 4 905 9
COLOUR_TEXT_REGION 4 905 9 905 51
STRAND 29 905 34
COLOUR_TEXT_REGION 29 905 34 905 51
STRAND 40 905 43
COLOUR_TEXT_REGION 40 905 43 905 51
STRAND 63 905 66
COLOUR_TEXT_REGION 63 905 66 905 51
HELIX 13 905 23
COLOUR_TEXT_REGION 13 905 23 905 50
HELIX 46 905 58
COLOUR_TEXT_REGION 46 905 58 905 50
STRAND 4 910 9
COLOUR_TEXT_REGION 4 910 9 910 51
STRAND 29 910 34
COLOUR_TEXT_REGION 29 910 34 910 51
STRAND 40 910 43
COLOUR_TEXT_REGION 40 910 43 910 51
STRAND 63 910 66
COLOUR_TEXT_REGION 63 910 66 910 51
HELIX 13 910 22
COLOUR_TEXT_REGION 13 910 22 910 50
HELIX 46 910 58
COLOUR_TEXT_REGION 46 910 58 910 50
STRAND 3 911 8
COLOUR_TEXT_REGION 3 911 8 911 51
STRAND 29 911 33
COLOUR_TEXT_REGION 29 911 33 911 51
STRAND 40 911 43
COLOUR_TEXT_REGION 40 911 43 911 51
STRAND 63 911 65
COLOUR_TEXT_REGION 63 911 65 911 51
HELIX 13 911 23
COLOUR_TEXT_REGION 13 911 23 911 50
HELIX 46 911 59
COLOUR_TEXT_REGION 46 911 59 911 50