Jpred secondary structure prediction results

QUERY           : ETDLLMKMVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEENWHKQFLKFAQALPAHGSASWLNLDDALQAVVGNSRSAFLHQLIAKLKSRHLQVLELNKIGSEPLDLSNLPAPFYVLLPESFAARITLLVQDKALPYVRVSMEYWHALEYKGELN : QUERY 
UniRef90_P44209 : ETDLLLKMVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEENWHKQFLKFAQALPAHGSASWLNLDDALQAVVGNSRSAFLHQLIAKLKSRHLQVLELNKIGSEPLDLSNLPAPFYVLLPESFAARITLLVQDKALPYVRVSFEYWHA-------- : UniRef90_P44209

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------16 :
OrigSeq         : ETDLLMKMVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEENWHKQFLKFAQALPAHGSASWLNLDDALQAVVGNSRSAFLHQLIAKLKSRHLQVLELNKIGSEPLDLSNLPAPFYVLLPESFAARITLLVQDKALPYVRVSMEYWHALEYKGELN : OrigSeq

Jnet            : --HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHH------------HHHHHHHH----HHHHHHHHHHHHH--HHHHHH-----------------EEE----HHHHHEEEE------EEEEEEEEHHHHE------ : Jnet
jhmm            : -HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHH------------HHHHHHHH-----HHHHHHHHHHHH-HHHHHHH-----------------EEE---HHHHHHHHEE------EEEEEEHHHHHHH------ : jhmm
jpssm           : --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHH------------HHHHHHHH----HHHHHHHHHHHHH--EEEEEE----------------EEEE-----HEEEEEEEE-----EEEEE-EEEEEEEE----- : jpssm

Lupas 14        : ------------------------------------------------------------------------------------------------------------------------------------------------------------------ : Lupas 14
Lupas 21        : ------------------------------------------------------------------------------------------------------------------------------------------------------------------ : Lupas 21
Lupas 28        : ------------------------------------------------------------------------------------------------------------------------------------------------------------------ : Lupas 28

Jnet_25         : ---BBB-BB--BB-BB-BBBBBB-B--BB--B---B---B--BB----BB--BB-BB-BBB----B-BB-B--BB-BBBB----BBBB-BB--B---BB-BB-B--B---BB-B--B-BBBBBBBB-BBBBBBBBBB---BBBBBBBBB-BBBBB-B----- : Jnet_25
Jnet_5          : ----B---B---B----B--B---B--BB--B--------------------B--BB-------------B--BB--B--------B--BB--B------B--B----------------BBBBB-------B-BBB-------B-B-B--B---------- : Jnet_5
Jnet_0          : ------------------------------------------------------------------------------------------------------------------------------------------------------------------ : Jnet_0
Jnet Rel        : 926899998700778778999999999999999830156655567764289999998851578887631440677776368863899999998860403100014677766777777752256437822122010221588734776221012110203589 : Jnet Rel


Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.