QUERY : LLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFV : QUERY
UniRef90_Q6GLQ9 : -VAEPQVAMFCGKLNMHVNIQTGKWEPDPSGTKSCIGTKEEVLHYCQEVYSDLQITNVVEANQPVSIDNWCKRGKKQCKGHSHIVVPFKCLVGEFV : UniRef90_Q6GLQ9
UniRef90_UPI0004572A74 : -VAEPQVAMFCGKLNMHIDIQTGKWEPDPLGIKSCLETKEEVLQYCREVYPDLQITNVVEANKPISIDNWCKKGKKRCQGHTHIVVPVKCLVGEFV : UniRef90_UPI0004572A74
UniRef90_F6U064 : LLAEPQVAMFCGKLNMHMNVQNGKWEADPAGTKTCLSAKEGILQYCQEVYPDLQITNVVEANQPVTIQNWCKKGRRLCRSHPHIVIPYRCLVGEFV : UniRef90_F6U064
UniRef90_UPI0002A49AF3 : -VAEPQVAMFCGKLNMHVNIQTGRWEPDPSGTKSCIRTKEGVLQYCQEVYPELQITNVVEANQPIQIKNWCRREKKVCKGHDHIVVPFKCLVGEFV : UniRef90_UPI0002A49AF3
UniRef90_G3VZN8 : -VAEPQIAMFCGKLNMHVNIQTGKWEPDPSGTKTCFGTREEVLQYCQEMYPELEITNVMEANKHVVIDNWCKKGKKQCKPRSHIVIPYKCIVGEFV : UniRef90_G3VZN8
UniRef90_L9KTP4 : -VAEPQIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFGTKEEVLQYCQEMYPELQITNVMEANQPVSIDDWCRRDRKQCK--SHIVIPFKCLVGEFV : UniRef90_L9KTP4
UniRef90_L9KTP4 : -VAEPQIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFGTKEEVLQYCQEA----------------------------------------------- : UniRef90_L9KTP4
UniRef90_H3A528 : --AEPQVALFCGKVNMHMDVRTGKWEPDPSGVESCFRNTDEILNYCQKVYPDLQITSVLEATRPVTIDNWCRKSRRKCKGHQRIVVPYRCIAGEYV : UniRef90_H3A528
UniRef90_UPI000388EE6B : -VSEPQVAVFCGKLTMHRNLQTGGWDPDAAGARSCFRNRQEILAYCQEVYPELQITNAVEGTQPVTIDNWCKKGRPQCTGHRHIVVPYRCLVGEFV : UniRef90_UPI000388EE6B
UniRef90_F7BVA8 : LLAEPQIAMFCGRLNMHMNVQNGKWESDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRDRKQCKTHPHFV----------- : UniRef90_F7BVA8
UniRef90_H9GXI8 : LLAEPQIAMFCGKLNMHINIQSGKWEPDPSGSKSCIGNKEGILQYCQEVYPELQITNVVEANQPVSIWDWCKKSRKQCRSHMHIVVPYRCL----- : UniRef90_H9GXI8
UniRef90_W5KU88 : LVAEPQIAMFCGRQLLHMNTETGQWEPDPQGRQGCFTQPSKILSYCQEMYPGLQISHVEEASAPVTIPAWCNKGWGYCQKRQSIVIPYRCLVGEYV : UniRef90_W5KU88
UniRef90_UPI00033157E2 : --------MLCGKLNMHVNIQTGKWEPDPSGTKSCFGTKEEVLQYCQEMYPELQITNVMEANQAVTVENWCRRDRKQC--LSHMVIPFKCLVGEFV : UniRef90_UPI00033157E2
UniRef90_UPI0003B46007 : -LAEPQIAMFCGRQLLHMNLQNGEWEPDPQGRQGCFKEPNEILSYCQEMYPALPISHIEESKRPVTIQAWCKKGLGHCQ----IVLPYRCLEGEYV : UniRef90_UPI0003B46007
UniRef90_B2GU74 : ----PQLALFCGRVPLHMDLTNGQWVSDPRGIPSCISSKDEILKYCREIYPELQITGVAEAAQPVTVTNWCQTQRSECKGHQHIVVPYHCLVGEFV : UniRef90_B2GU74
UniRef90_UPI000441A7B7 : --------MFCGKLVLHLNVQTGHWEPDAIGTRTCFHTPEEIRSYCQEVYPELQITNAVEGTQPVTIDKWCKKGRSSCKGQMHIVVPYQCLVGEFV : UniRef90_UPI000441A7B7
UniRef90_UPI0003C289F8 : --ASPQVAGLCGKPALRLDLDTGRWAPGPGPAPHCLSSARQALAYCQQAYPELQITSAVEGPEPVTIDNWCRKGRPSCRGHRHTVVPYRCLVGEFV : UniRef90_UPI0003C289F8
UniRef90_W5LYJ6 : --------MFCGKLNMHINIQTGRWEPDPSGTKSCLDSKEAILQYCQEMYPELQITNYVEANQPVRIENWCKKGKKQCKGHAHAVVPYKCLVGEFV : UniRef90_W5LYJ6
UniRef90_UPI000441B696 : --------MFCGKLNMHVNIQTGKWETDPSGTKSCFGRKEEILEYCQEIYPDLRITNVVELNEPVCIKNWCKKGKKQCKGHTHIVVPFKCLVGEFV : UniRef90_UPI000441B696
UniRef90_F6TDQ9 : ----PQVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQHVLAYCRQVYPDLQIGRVEEASRPIPMERWCGGARGTRCPH-HVVIPYHCLPGEFV : UniRef90_F6TDQ9
UniRef90_V8NFY2 : -VAEPQIAMFCGKLNMHVNIQTGKWETDPSGTKSCFGRKEEILQYCQEIYPDLQITNVVEANEPVNIKNWCRFFHQECKSHQYW------------ : UniRef90_V8NFY2
UniRef90_UPI0003331E34 : -----QVAGLCGHITLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELHITRVEQAAQAIPMERWCGGARSGRCAHPHHVVPFHCLPGEFV : UniRef90_UPI0003331E34
UniRef90_A0A016SY78 : ----PLVAFECGYRNKYMH-EDGVWVSDENRYATCLSGKLDILKYCKKAYPKLNITNIVEYSHEVAIEKWCREEGTPCK-WTHTVRPYQCIDGEF- : UniRef90_A0A016SY78
UniRef90_T1I2Q0 : ---EPQVAMLCDSYHSQYMTESGRWTTDTTHKFTCPKEKMDILDYCKKVYPKHDITNIVESSHFIKISNWCRVGHTKCK-RTAWVKPFRCLEGPF- : UniRef90_T1I2Q0
UniRef90_T1KXD5 : ---QPMVAMLCGRGNQYLD-ENKRWVSDPDPKAVCTKDKLEILEYCRKVYPKKDIRNIVEYSKYMVVDNWCKFGQK--CGGRHLVKPYRCLEGPF- : UniRef90_T1KXD5
UniRef90_E5SE93 : ----PQVVFRCGFRNRYM-TEDGSWASDPDSRASCLTGKLDILKYCRKVYWNLTVTNIVESSHFVEVDNWCKDDGYPCK-WSFWVKPYRCMVGEF- : UniRef90_E5SE93
UniRef90_C3XR12 : ----PMVAMVKDKMNQHINLDSGKWETDPTGKHGFKDKPQDILDYCKMMYPNLEITNIEEHTKEIKIENWCKPGSTPCGGHPHKVRPFRCLVGRF- : UniRef90_C3XR12
UniRef90_K7IPS4 : --SEPQVATLCEYLAQHMGEQ-GRWISS-SDTKSCMTDKLEILQYCKKAYPKRDITNIVESSHYVRVSGWCKPGKNKCKL-SRWVKPYRCLEGPF- : UniRef90_K7IPS4
UniRef90_Q06BR2 : ---EPMVAFICNKPAMHR-VPSG-WVPDDDPAKSCVKQPEEILEYCKKLYPDHDITNVLQASYKVTIPNWCGFNVTHCHKHGHTVRPFRCLVGPF- : UniRef90_Q06BR2
UniRef90_E0VLF5 : ---EPQVAILCEAYHSQYMTEQGKWITDINNKATCLKDKMDILDYCKKVYPKRDVTNIVEASHYLKVPNWCKVGHKKCKI-SRWVKPFRCLEGPF- : UniRef90_E0VLF5
UniRef90_J9EP68 : ----PLVAFQCGFRNRFM-SEDGAWLSDPSTLATCFSGKLDILKYCRKAYPKLDVTNIVEYSHEVEIPGWCREQGSSCR-WTHTVRPYQCIVGEF- : UniRef90_J9EP68
UniRef90_Q4ZHV6 : --AEPQVAVLCEAYHPQYMSAAGRWTPDLTTKPHCLKDKMEILDYCKKVYPSHDITNIVEASHYVKVSNWCKLGAAKCKV-TRWVKPFRCLEGPF- : UniRef90_Q4ZHV6
UniRef90_A7RTM2 : ---EPLVAMWCGKVNQHMDINTGEWATDENGHSMCSTSTKQVLKYCQHVYPKLNVSNVVEANMNVTIKTWCDPKNVNCNA-TKTVLPYRCLVGKF- : UniRef90_A7RTM2
UniRef90_W8ACZ5 : ---EPQIAVLCEAGQPQYLSEEGRWVTDLNKKATCLRDKMDLLDYCKKAYPNRDITNIVESSHYQKIGGWCRQGAAKCKGAHRWIKPFRCL-GPF- : UniRef90_W8ACZ5
UniRef90_H2WGW8 : -----MVGFSCGYRNQYL-TENGTWTSDSERYATCFFGKLDILKYCRRTYPTRNITNIVEYSHEVSISGWCREEGSPCK-YTHSVTPYHCIEGEFL : UniRef90_H2WGW8
UniRef90_H2LQ91 : --AEPQIAMFCGRQLLYMNVQTGQWEPDPQGRQGCFKEPSEILSFCQEVHPDVQIRGVFPKNPPVPIPGWSKKGWGHL-----IVLPYRCLEGEYV : UniRef90_H2LQ91
UniRef90_G5BXP2 : -----QVAGLCGLPTLHRDLRTGRWEPDPQRSQRCLRDPQRVLEYCRQMYPELHITRVEQAAPAIPMEHWCGGARSGRCAHHHQVVPFRCLPGEFV : UniRef90_G5BXP2
UniRef90_F1R8S2 : LLAEPQVAMFCGKLNMHINVQSGKWEPDPTGTKSCISTKEGILQYCQEVYPDLQITNVVEANQPQP------------------------------ : UniRef90_F1R8S2
UniRef90_T2MFP9 : ---EPRVAINCGKVPFYVDLETGSWIADSNGVAVCDADKDEVKRYCQKTYPKLNISNVVEANTAVKFKNWCQPGIQQC-SVTKRVVPFRCLVNEY- : UniRef90_T2MFP9
UniRef90_E9G336 : ---EPQVAVVCDLRNQYMDS-TGKWVSDLENKSYCLKDKIEILDFCRKVYRGRNITNIVEAPRSVKIDNWCKLGHRKCKT-TQSVKPYRCL-GAF- : UniRef90_E9G336
UniRef90_UPI0004543397 : -VGDPQVALGCGTLSLHRDLRTGQWQPDPQRSHGCFRGPHQVLAYCQQMYPELRVGR-VEAAEPIPMARWCR-GAPGERCPHHVIVPYRCLPGEFV : UniRef90_UPI0004543397
UniRef90_T1JN54 : --------MICGKQNQYMD-ETDHWVTDLDDKAICTKDKVQILEYCHKVYPKKDITNIVESSHYFKIENWCKVGQTKCKV-SHWVKPFRCLEGSF- : UniRef90_T1JN54
UniRef90_B7QN63 : ---QPMVALLCGRINNQYLAEGQRWVSDPDPKAVCSKDKLSILEYCRKVYPKRDIRNIVESSRYYHVDGWCKVGGRSCRG-SHWVKPYRCLEGDF- : UniRef90_B7QN63
UniRef90_B4I933 : ---EPQIAVLCEAGQIYQPSEEGRWVTDLSKKTTCLRPSSCLAQYSRSAYPNRDITNIVESSHYQKIGGWCRQGAAKCKGSHRWIKPFRCL-GPF- : UniRef90_B4I933
UniRef90_R7TD28 : -----MVAFVCGRPAMFLK-DDGSWQKDDS--TDCLSKPEEILDYCRKVYPDLDIRNVVEASKKARVPSWCGFNHEKCSAHTYTVRPFRCWVGAF- : UniRef90_R7TD28
UniRef90_E2QDB4 : ---EPMVAFICERPAMHRGV-NG-WIADKS--TDCLNRMEDILSYCQRMYPDHNITNVVEASYLVTIKDWPMTSAD--RMHPHRVRPFRCLVGGF- : UniRef90_E2QDB4
UniRef90_G1QQU0 : -----------------------------------------ILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFV : UniRef90_G1QQU0
UniRef90_H3FMK4 : ------------------MAENGSWVSDDNKYATCLEGNLDKLKYCKKVYPNLNVTNIVEYSHEVTLADWCREEGDHC-TSTKTVRPYRCIVGEF- : UniRef90_H3FMK4
UniRef90_UPI0002651463 : ---ELRVAVRKGYFNKYADILSGQWLTDTSAEFT--ADATEVLNYCKTKYPDTEINNIVDSSQPILIDQWCPVNGDAC-TSSAKVTYYRCLVGPF- : UniRef90_UPI0002651463
UniRef90_B4PX09 : ---EPQIAVLCEAGQVYQPSEEGRWVTDLSKKTTCLRDKMDLLDYCKKAYPNRDITNIVESSHYQKIGGWCRQG---------------------- : UniRef90_B4PX09
UniRef90_T1EIP9 : ----PMVAFNCKKPAMHMT--NEGWVSDDGSAIECPHDPKNILEYCKRVYPDLDVRNVMETTELSQITNWCRNSKRRCYHHSYTVRPYKCL----- : UniRef90_T1EIP9
UniRef90_M7BB59 : LLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQELHPKHELTGI-------------------------------------- : UniRef90_M7BB59
UniRef90_B3RTK7 : -----RVTFNCNKVPKYYDLVSKDFVDDKSGIAQCPKNKTEILDYCRKVYKDYDIVNIVHENMYQHFNNWCDNERKMCYFSGTSRV-YRCVVGLF- : UniRef90_B3RTK7
UniRef90_M7BNW8 : ------------------------------------------------VYPELQITNAVEGTQPVTIDNWCKKGRPQCKGHRHIVVPYRCLVGEFV : UniRef90_M7BNW8
UniRef90_H2UQI6 : -----------------------------------------ILSYCQEMYPALTISHVEESKRPVTIHAWCKKGWGHCQTHPFIVLPYRCLDGEYV : UniRef90_H2UQI6
UniRef90_E9IUW4 : --------------------EQGRWVSSTD-KKSCMTDKLEILEYCKKAYPKRDITNIVESSHYVRVSGWCKPGRTKCKL-SRWVKPYRCL----- : UniRef90_E9IUW4
UniRef90_W5M8N9 : --------------------------------------------YCTEMYPDLQIVRVEEGPSPVTISNWCHRPGGHCQSHPYIVIPYRCLVGEFV : UniRef90_W5M8N9
UniRef90_G4LY13 : ------VAFECGKPAIYLN--NEFWVTDL--TQGCLEDELSILNYCKKVYSERNITAVVSAPPDVVLSDWCEFAHKKCQSKRHEIKPFICL----- : UniRef90_G4LY13
UniRef90_F6XMY7 : ----PQLALFCGRVPLHMDLTNGQWVSDPRGIPSCISSKDEILKYCREVSVGVQISIIVPVGEFVSVPDKCRFLHRECESYQHW------------ : UniRef90_F6XMY7
UniRef90_E4YU01 : --STPAIASRCKRLAQKR--ENGVWTSSKVSSTCSTFDDEEAVRICKEAFPSLFIIGVRPTGAEHVEGPWCQATHRPCKGKGHMVMVYECL----- : UniRef90_E4YU01
UniRef90_B4L4L6 : ---------------------------------------MDLLDYCKKAYPNRDITNIVESSHYQKIGGWCRQGAAKCKGAHRWIKPFRCLV---- : UniRef90_B4L4L6
UniRef90_Q5ISQ4 : -----QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQGDPSTR------------------------------------------ : UniRef90_Q5ISQ4
UniRef90_Q0IFC5 : -----------------------------------------------QVYPGRDITNIVESSHYQKIGGWCRQGAAKCKGAQRWIKPFRCLEGPF- : UniRef90_Q0IFC5
UniRef90_V7PZ44 : ---TPRIMYWWGKVNQHID-NAGVWQTDPDGVSGANLDK---LTYCKKWYPKLNITNTKDYKNE-TINTW-------------------------- : UniRef90_V7PZ44
UniRef90_V7PZ44 : ---TPRIMYWWGKVNQHID-NTGVWQTDPDGVSGANLDK---LTYCKKWYPKT--IKVIDHKLE-TIDKWKERGNK-------------------- : UniRef90_V7PZ44
UniRef90_V7PWG9 : ---TPRIMYWWGKVNQHISTDSGVWQTDPDGSSGAILDK---LTYCKRWYPN---TISVENYKNETIDTWRAAGNAGAYTYTTM------------ : UniRef90_V7PWG9
UniRef90_V7PWG9 : ---TPRIMYWWGMVNQHIDS-NGVWQTDSDGSSGANLDK---LTYCKKFWTN---TVSVEDYKNETIDTWRAAGNRGAYTGTK--MSFKCV----- : UniRef90_V7PWG9
UniRef90_X1JBQ8 : --STPRVAYWPGKVNQHFNVTKGVWMTDPDKISSPDIDK---LAYCKKWY-GFDIVFVKEYKLE-TITTWMAIGNKG------------------- : UniRef90_X1JBQ8
UniRef90_F1RLF8 : ------------------------------------------------MYPELQIARVEQATQAIPMEQWCGDARGGRCAHPHHVVPFRCLPGEFV : UniRef90_F1RLF8
UniRef90_B4R7F3 : ---EPQIAVLCEAGQIYQPSEEGRWVTDLSKKTTCLRDKMDLLDYCKKT----------------------------------------------- : UniRef90_B4R7F3
UniRef90_G6DN24 : --AEPQVAVLCEAYHPQYMSAAGRWTPDLTTKPHCLKDKMEILDYCKKV----------------------------------------------- : UniRef90_G6DN24
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91---- :
OrigSeq : LLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFV : OrigSeq
Jnet : -----EEEEE-------EE----EEEE-----------HHHHHHHHHHH-----EEEEEE----EE----------------EEEEEEEE------ : Jnet
jhmm : -----EEEEE------EEE-----EE------------HHHHHHHHHHH-----EEEEEE-----------------------EEEEEEE------ : jhmm
jpssm : ----HHHHHHHH-H---------EEEE-----------HHHHHHHHHH------EEEEEE---EEEE---------------EEEEEEEE------ : jpssm
Lupas 14 : ------------------------------------------------------------------------------------------------ : Lupas 14
Lupas 21 : ------------------------------------------------------------------------------------------------ : Lupas 21
Lupas 28 : ------------------------------------------------------------------------------------------------ : Lupas 28
Jnet_25 : --B-BBBBB-B--BBBBB-B----B--B------B------BB-BB--BB--B-BBBBB-----B-B--BB------B----B-BBBB-BB-B-B- : Jnet_25
Jnet_5 : ----B-BB---------------------------------B---B--------B--B--------------------------B-BB-B------ : Jnet_5
Jnet_0 : ---------------------------------------------B-------------------------------------------------- : Jnet_0
Jnet Rel : 994230111024042510067641650367765677642899998763078884589860675131246777766665456417767862578899 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.