SILENT_MODE BLOCK_FILE jp_Ig8Spgo.concise.blc MAX_NSEQ 901 MAX_INPUT_LEN 903 OUTPUT_FILE jp_Ig8Spgo.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 332 890 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 891 332 900 H SPACE SUB_CHARS 1 891 332 900 E SPACE SUB_CHARS 1 891 332 900 - SPACE STRAND 34 894 39 COLOUR_TEXT_REGION 34 894 39 894 51 STRAND 66 894 71 COLOUR_TEXT_REGION 66 894 71 894 51 STRAND 113 894 114 COLOUR_TEXT_REGION 113 894 114 894 51 STRAND 178 894 181 COLOUR_TEXT_REGION 178 894 181 894 51 STRAND 204 894 209 COLOUR_TEXT_REGION 204 894 209 894 51 HELIX 4 894 13 COLOUR_TEXT_REGION 4 894 13 894 50 HELIX 21 894 29 COLOUR_TEXT_REGION 21 894 29 894 50 HELIX 45 894 61 COLOUR_TEXT_REGION 45 894 61 894 50 HELIX 85 894 105 COLOUR_TEXT_REGION 85 894 105 894 50 HELIX 121 894 134 COLOUR_TEXT_REGION 121 894 134 894 50 HELIX 136 894 136 COLOUR_TEXT_REGION 136 894 136 894 50 HELIX 138 894 150 COLOUR_TEXT_REGION 138 894 150 894 50 HELIX 160 894 173 COLOUR_TEXT_REGION 160 894 173 894 50 HELIX 187 894 198 COLOUR_TEXT_REGION 187 894 198 894 50 HELIX 229 894 234 COLOUR_TEXT_REGION 229 894 234 894 50 HELIX 250 894 256 COLOUR_TEXT_REGION 250 894 256 894 50 HELIX 270 894 272 COLOUR_TEXT_REGION 270 894 272 894 50 HELIX 279 894 291 COLOUR_TEXT_REGION 279 894 291 894 50 HELIX 296 894 318 COLOUR_TEXT_REGION 296 894 318 894 50 HELIX 320 894 328 COLOUR_TEXT_REGION 320 894 328 894 50 STRAND 34 899 39 COLOUR_TEXT_REGION 34 899 39 899 51 STRAND 66 899 71 COLOUR_TEXT_REGION 66 899 71 899 51 STRAND 112 899 116 COLOUR_TEXT_REGION 112 899 116 899 51 STRAND 178 899 181 COLOUR_TEXT_REGION 178 899 181 899 51 STRAND 205 899 209 COLOUR_TEXT_REGION 205 899 209 899 51 HELIX 4 899 13 COLOUR_TEXT_REGION 4 899 13 899 50 HELIX 21 899 29 COLOUR_TEXT_REGION 21 899 29 899 50 HELIX 45 899 61 COLOUR_TEXT_REGION 45 899 61 899 50 HELIX 86 899 105 COLOUR_TEXT_REGION 86 899 105 899 50 HELIX 125 899 133 COLOUR_TEXT_REGION 125 899 133 899 50 HELIX 138 899 150 COLOUR_TEXT_REGION 138 899 150 899 50 HELIX 158 899 173 COLOUR_TEXT_REGION 158 899 173 899 50 HELIX 187 899 198 COLOUR_TEXT_REGION 187 899 198 899 50 HELIX 250 899 257 COLOUR_TEXT_REGION 250 899 257 899 50 HELIX 279 899 291 COLOUR_TEXT_REGION 279 899 291 899 50 HELIX 296 899 318 COLOUR_TEXT_REGION 296 899 318 899 50 HELIX 320 899 329 COLOUR_TEXT_REGION 320 899 329 899 50 STRAND 34 900 39 COLOUR_TEXT_REGION 34 900 39 900 51 STRAND 66 900 71 COLOUR_TEXT_REGION 66 900 71 900 51 STRAND 178 900 180 COLOUR_TEXT_REGION 178 900 180 900 51 STRAND 204 900 209 COLOUR_TEXT_REGION 204 900 209 900 51 HELIX 4 900 13 COLOUR_TEXT_REGION 4 900 13 900 50 HELIX 21 900 29 COLOUR_TEXT_REGION 21 900 29 900 50 HELIX 45 900 61 COLOUR_TEXT_REGION 45 900 61 900 50 HELIX 84 900 104 COLOUR_TEXT_REGION 84 900 104 900 50 HELIX 119 900 137 COLOUR_TEXT_REGION 119 900 137 900 50 HELIX 139 900 151 COLOUR_TEXT_REGION 139 900 151 900 50 HELIX 161 900 173 COLOUR_TEXT_REGION 161 900 173 900 50 HELIX 188 900 197 COLOUR_TEXT_REGION 188 900 197 900 50 HELIX 228 900 236 COLOUR_TEXT_REGION 228 900 236 900 50 HELIX 252 900 255 COLOUR_TEXT_REGION 252 900 255 900 50 HELIX 268 900 273 COLOUR_TEXT_REGION 268 900 273 900 50 HELIX 279 900 291 COLOUR_TEXT_REGION 279 900 291 900 50 HELIX 296 900 318 COLOUR_TEXT_REGION 296 900 318 900 50 HELIX 320 900 328 COLOUR_TEXT_REGION 320 900 328 900 50