SILENT_MODE BLOCK_FILE jp_IxyXI9Z.concise.blc MAX_NSEQ 981 MAX_INPUT_LEN 983 OUTPUT_FILE jp_IxyXI9Z.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 141 970 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 971 141 980 H SPACE SUB_CHARS 1 971 141 980 E SPACE SUB_CHARS 1 971 141 980 - SPACE STRAND 32 974 37 COLOUR_TEXT_REGION 32 974 37 974 51 STRAND 45 974 51 COLOUR_TEXT_REGION 45 974 51 974 51 STRAND 58 974 61 COLOUR_TEXT_REGION 58 974 61 974 51 STRAND 74 974 78 COLOUR_TEXT_REGION 74 974 78 974 51 STRAND 106 974 108 COLOUR_TEXT_REGION 106 974 108 974 51 STRAND 112 974 118 COLOUR_TEXT_REGION 112 974 118 974 51 STRAND 134 974 135 COLOUR_TEXT_REGION 134 974 135 974 51 HELIX 121 974 130 COLOUR_TEXT_REGION 121 974 130 974 50 STRAND 32 979 36 COLOUR_TEXT_REGION 32 979 36 979 51 STRAND 45 979 51 COLOUR_TEXT_REGION 45 979 51 979 51 STRAND 58 979 61 COLOUR_TEXT_REGION 58 979 61 979 51 STRAND 74 979 78 COLOUR_TEXT_REGION 74 979 78 979 51 STRAND 100 979 101 COLOUR_TEXT_REGION 100 979 101 979 51 STRAND 105 979 109 COLOUR_TEXT_REGION 105 979 109 979 51 STRAND 112 979 118 COLOUR_TEXT_REGION 112 979 118 979 51 STRAND 134 979 135 COLOUR_TEXT_REGION 134 979 135 979 51 HELIX 27 979 27 COLOUR_TEXT_REGION 27 979 27 979 50 HELIX 64 979 69 COLOUR_TEXT_REGION 64 979 69 979 50 HELIX 121 979 130 COLOUR_TEXT_REGION 121 979 130 979 50 STRAND 15 980 16 COLOUR_TEXT_REGION 15 980 16 980 51 STRAND 32 980 39 COLOUR_TEXT_REGION 32 980 39 980 51 STRAND 45 980 51 COLOUR_TEXT_REGION 45 980 51 980 51 STRAND 58 980 61 COLOUR_TEXT_REGION 58 980 61 980 51 STRAND 74 980 77 COLOUR_TEXT_REGION 74 980 77 980 51 STRAND 113 980 117 COLOUR_TEXT_REGION 113 980 117 980 51 STRAND 134 980 135 COLOUR_TEXT_REGION 134 980 135 980 51 HELIX 121 980 129 COLOUR_TEXT_REGION 121 980 129 980 50