SILENT_MODE
BLOCK_FILE jp_IxyXI9Z.concise.blc
MAX_NSEQ 981
MAX_INPUT_LEN 983
OUTPUT_FILE jp_IxyXI9Z.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 141 970   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 971 141 980 H SPACE
SUB_CHARS 1 971 141 980 E SPACE
SUB_CHARS 1 971 141 980 - SPACE
STRAND 32 974 37
COLOUR_TEXT_REGION 32 974 37 974 51
STRAND 45 974 51
COLOUR_TEXT_REGION 45 974 51 974 51
STRAND 58 974 61
COLOUR_TEXT_REGION 58 974 61 974 51
STRAND 74 974 78
COLOUR_TEXT_REGION 74 974 78 974 51
STRAND 106 974 108
COLOUR_TEXT_REGION 106 974 108 974 51
STRAND 112 974 118
COLOUR_TEXT_REGION 112 974 118 974 51
STRAND 134 974 135
COLOUR_TEXT_REGION 134 974 135 974 51
HELIX 121 974 130
COLOUR_TEXT_REGION 121 974 130 974 50
STRAND 32 979 36
COLOUR_TEXT_REGION 32 979 36 979 51
STRAND 45 979 51
COLOUR_TEXT_REGION 45 979 51 979 51
STRAND 58 979 61
COLOUR_TEXT_REGION 58 979 61 979 51
STRAND 74 979 78
COLOUR_TEXT_REGION 74 979 78 979 51
STRAND 100 979 101
COLOUR_TEXT_REGION 100 979 101 979 51
STRAND 105 979 109
COLOUR_TEXT_REGION 105 979 109 979 51
STRAND 112 979 118
COLOUR_TEXT_REGION 112 979 118 979 51
STRAND 134 979 135
COLOUR_TEXT_REGION 134 979 135 979 51
HELIX 27 979 27
COLOUR_TEXT_REGION 27 979 27 979 50
HELIX 64 979 69
COLOUR_TEXT_REGION 64 979 69 979 50
HELIX 121 979 130
COLOUR_TEXT_REGION 121 979 130 979 50
STRAND 15 980 16
COLOUR_TEXT_REGION 15 980 16 980 51
STRAND 32 980 39
COLOUR_TEXT_REGION 32 980 39 980 51
STRAND 45 980 51
COLOUR_TEXT_REGION 45 980 51 980 51
STRAND 58 980 61
COLOUR_TEXT_REGION 58 980 61 980 51
STRAND 74 980 77
COLOUR_TEXT_REGION 74 980 77 980 51
STRAND 113 980 117
COLOUR_TEXT_REGION 113 980 117 980 51
STRAND 134 980 135
COLOUR_TEXT_REGION 134 980 135 980 51
HELIX 121 980 129
COLOUR_TEXT_REGION 121 980 129 980 50