SILENT_MODE BLOCK_FILE jp_YX34XPY.concise.blc MAX_NSEQ 861 MAX_INPUT_LEN 863 OUTPUT_FILE jp_YX34XPY.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 177 850 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 851 177 860 H SPACE SUB_CHARS 1 851 177 860 E SPACE SUB_CHARS 1 851 177 860 - SPACE STRAND 8 854 11 COLOUR_TEXT_REGION 8 854 11 854 51 STRAND 29 854 33 COLOUR_TEXT_REGION 29 854 33 854 51 STRAND 50 854 53 COLOUR_TEXT_REGION 50 854 53 854 51 STRAND 62 854 65 COLOUR_TEXT_REGION 62 854 65 854 51 STRAND 69 854 74 COLOUR_TEXT_REGION 69 854 74 854 51 STRAND 108 854 111 COLOUR_TEXT_REGION 108 854 111 854 51 STRAND 128 854 130 COLOUR_TEXT_REGION 128 854 130 854 51 STRAND 135 854 140 COLOUR_TEXT_REGION 135 854 140 854 51 STRAND 144 854 148 COLOUR_TEXT_REGION 144 854 148 854 51 STRAND 166 854 172 COLOUR_TEXT_REGION 166 854 172 854 51 HELIX 14 854 23 COLOUR_TEXT_REGION 14 854 23 854 50 HELIX 38 854 41 COLOUR_TEXT_REGION 38 854 41 854 50 HELIX 78 854 101 COLOUR_TEXT_REGION 78 854 101 854 50 HELIX 127 854 127 COLOUR_TEXT_REGION 127 854 127 854 50 HELIX 149 854 154 COLOUR_TEXT_REGION 149 854 154 854 50 STRAND 8 859 11 COLOUR_TEXT_REGION 8 859 11 859 51 STRAND 29 859 33 COLOUR_TEXT_REGION 29 859 33 859 51 STRAND 51 859 52 COLOUR_TEXT_REGION 51 859 52 859 51 STRAND 63 859 65 COLOUR_TEXT_REGION 63 859 65 859 51 STRAND 69 859 74 COLOUR_TEXT_REGION 69 859 74 859 51 STRAND 111 859 112 COLOUR_TEXT_REGION 111 859 112 859 51 STRAND 135 859 140 COLOUR_TEXT_REGION 135 859 140 859 51 STRAND 145 859 148 COLOUR_TEXT_REGION 145 859 148 859 51 STRAND 166 859 172 COLOUR_TEXT_REGION 166 859 172 859 51 HELIX 14 859 23 COLOUR_TEXT_REGION 14 859 23 859 50 HELIX 38 859 41 COLOUR_TEXT_REGION 38 859 41 859 50 HELIX 78 859 83 COLOUR_TEXT_REGION 78 859 83 859 50 HELIX 86 859 101 COLOUR_TEXT_REGION 86 859 101 859 50 HELIX 108 859 110 COLOUR_TEXT_REGION 108 859 110 859 50 HELIX 126 859 131 COLOUR_TEXT_REGION 126 859 131 859 50 HELIX 149 859 154 COLOUR_TEXT_REGION 149 859 154 859 50 STRAND 8 860 10 COLOUR_TEXT_REGION 8 860 10 860 51 STRAND 29 860 33 COLOUR_TEXT_REGION 29 860 33 860 51 STRAND 37 860 37 COLOUR_TEXT_REGION 37 860 37 860 51 STRAND 50 860 54 COLOUR_TEXT_REGION 50 860 54 860 51 STRAND 62 860 64 COLOUR_TEXT_REGION 62 860 64 860 51 STRAND 70 860 74 COLOUR_TEXT_REGION 70 860 74 860 51 STRAND 107 860 111 COLOUR_TEXT_REGION 107 860 111 860 51 STRAND 116 860 116 COLOUR_TEXT_REGION 116 860 116 860 51 STRAND 128 860 130 COLOUR_TEXT_REGION 128 860 130 860 51 STRAND 135 860 139 COLOUR_TEXT_REGION 135 860 139 860 51 STRAND 144 860 148 COLOUR_TEXT_REGION 144 860 148 860 51 STRAND 166 860 172 COLOUR_TEXT_REGION 166 860 172 860 51 HELIX 14 860 23 COLOUR_TEXT_REGION 14 860 23 860 50 HELIX 38 860 42 COLOUR_TEXT_REGION 38 860 42 860 50 HELIX 78 860 90 COLOUR_TEXT_REGION 78 860 90 860 50 HELIX 94 860 101 COLOUR_TEXT_REGION 94 860 101 860 50 HELIX 149 860 154 COLOUR_TEXT_REGION 149 860 154 860 50