QUERY               : IYRAIVTSKFRTEKMLNFYNSIGSGPDKNTIFITFGRSEPWSSNENEVGFAPPYPTDSVLGVTDMWTHMMGTVKVLPSMLDAVIPRRDWGDTRYPDPYTFRINDIVVCNSAPYNATESGAGWLVYRCLDVPDTGMCSIASLTDKDECLKLGGKWTPSARSMTPPEGRGDAEGTIEPGDGYVWEYLFEIPPDVSINRCTNEYIVVPWPEELKEDPTRWGYEDNLTWQQDDFGLIYRVKANTIRFKAYLDSVYFPEAALPGNKGFRQISIITNPLEAKAHPNDPNVKAEKDYYDPEDLMRHSGEMIYMENRPPIIMAMDQTEEINILFTF : QUERY 
UniRef90_D7RMF9     : IYRSIVTSKFRTEKMYNFYRTIGDGEDQNTMYVSFGRAQPWAPNENDPGFAPPYPVDDSEGVEDVWTNMMGCVKVYKSMLDCVVPRKDWGDTSYPNPFTFQIGEIVVANSQPQNRTDVGAGWMVYRCVDVPESGACSILSLDNKTECIKLGGKWTANVPSVKAPAGQGDTEGMVDTGDGYLWEYLYEIPPDVSINRCTNEYIVVPWPEEIAEDPERWGYENNLTWQQDDYGLIYRIKGNTIRFKAFLDSVYFPEFSLPGNKGFRQLSIISNPLEAKAHPSDPIIKAEKEYYDVIDLSRHSGEMIYMENRPPVIRSMDQTEEINIIFEF : UniRef90_D7RMF9
UniRef90_K4I662     : IYRAIVTSKFRTEKMQNFYDSIGDSANKNSLYITFGRSTPWADNENEVGFAPPYPVDDTQGVVDMWTNMMGSVKVMPSMLDAIVPRKDWGDIRYPNPRNFQIGEIVVVNSAPYNATEVGAGWLVYRVLDIPDSGTCSIQDINNKDECIKLGGKWTSSIPSANPPRGRGDAEKTIDTNDGYLWEYLYEIPPDVSINRCTNEYIVVPWPDEIAEDPIRWGLQNNLSWQQDDYGLIYRVKAYTMRFKAYFDSVYFPEAALPGNDGFRQISVIVNPLEKKDKPNDPNVKAEDLYYKPHDLERHSGEMIYMENRAPIIMAMDQTEEINIIFEF : UniRef90_K4I662
UniRef90_E5E4E5     : VYRAIITSKFRTEKMLNFYQTIGNGADKNSIYLSFGRDTPWASNENDPGFAPPYPVDNTRGVEDVWTNMLGAVKVNQSLLDAVIPRKDWGDVRYSNSRTFQIGEIIVTNTAPYNRVTGAEGWLVYRVVDVPSLGVCSIGSITDKGECIKLGGKWTTSVESRFAPSGRGDTEGMVDTGDGYLWEYLYEIPPDVSINRCTNEHIVVPWPDELGSDPARWGYQHNLSWQQNDFGLIFRIKAVSMRFKAFFDSVHFPNASVLGNKGFRQLSMIVNPFEAKAKPTDPNVKAEKENYSANQLFRHSGEMVYIENRQPIVRSMDQTEEINIIFEF : UniRef90_E5E4E5
UniRef90_I7LH81     : IYRAIVTSKFRTKKMQNFYQMVGDGADQNALYVTFGRSKPWAVNENDPGFAPPYPVDDTEGEVDMWTNMMGSVKVYKSMLDAITPRKDWGDIDYPNPRNFQIGEIIVTNSAPYNKTDIGSGWMIYRCIDVPSVGTCSITDFTNKIECIKLGGIWTSSVESISPPSGRGDTEGKVDMGDGYLWEYLYEIPPDVSINRCTNEYIVVPWPDEVEADPSRWGYQNNLTWQQNDYGIIYRVKANTVRFKAYLDSVYFPEASLPGNDGFRQIAVIENPLEAKAHPNDPNVKCEKEYYDVINMERHSGEMIYMENRPPIVRAMDQTEEVNIIFEF : UniRef90_I7LH81
UniRef90_E5EYT7     : VYRAIITSKFRTEKMLNFYRSVGDGPTENSIYVSFGRKESWAPNENDPGFAPPYPIDNVQGMMSVWTDMLGVVKVNQSMLDAVIPRKDWGDIRYTNSRTFNIGEIVVTNTAPFNRAPGAAGWMVYRVVDVPGQGVCSIDTITNKEECTKLGGKWTPNVESFIVPSGRGDTEGLVDTGDGYLWEYLYEIPPDVSINRCTNEYIVVPWPEEIKEDPTRWGYQHNLTWQQDDYGLIFRIRAVSIRFKAYFDSLYFPAASILGNTGFRQIALIVNPLLKKSKPTDANKKATAQYYTLSDLERHSGEMLYIENRPPITRSMDQTEEVSIIFSF : UniRef90_E5EYT7
UniRef90_D9ICQ6     : IYRAVVTGKFRTENMMNFRDMIGDDPDHNSIYMSIGRTEQWADNESDPEFAPPYPNDDTDGIVDMWTHMIGATKVPGEMIDAIVPRKDWGDTRYPNPKIFYVNDIVVVNSAPYNRTDYGKGWMIYRVVDVPDIGSCSISSITGKVECVRIGGIWTPTHESVEPPRGEANG---IDMGDGYKWEYLYTIPPDVVINRCTNEHIVVPFPDELEEDPVRWGYDNVIKWYPDMYDLVFRMKVHSMRFRAYMDSLFFPQASLPGNRGFRQISVIVNPLLKKAQPTDPEVKATGQFYTKDQFELDSGQMIYMENRQPIIRSPDQTEEVSIIFEF : UniRef90_D9ICQ6
UniRef90_A7XF97     : IYRSIITSKFRTEKLLNFYNSVGDGANQITIYGTFGRSEPWSENEKEVGFAPPYPTDSTAGVVDMWTHMMGAVKINKSLLDAVIPRKDWGDTGQDNPRTFFINDIVVVNSAPYNRTDVGSGWMVYRVTDVPDRGYCSISSIDAKVECLKLGGKWTPTHESIAPPVGKGDS---IDMGDGYRWEYLYTIPPDAAINRCTNEHIVVPFPDELRQDPARWGYDNVITWY-NDYNLLYRLKVVTLRFQAYMDSAQFPTTALVGNTGFRQLSIILNPLEKKARPSDPDVKAVQDKYRPQDLEPHSGEMIYMENRQPIVRSLDQTELVSVLFEF : UniRef90_A7XF97
UniRef90_E1A1H6     : -YRAIVTSKFRTKNLLNFYDMVGDEPTKNTIYATFGRDTPWSTNETDVGFAPPYPNDSVDGVVDMWTNMLGAVKINKSLLDAIIPRKDWGDIRYDNPKTFFIDDIVVVNSATYNRTDSSVGWMIYRCVDVPSIGSCSISGIDDKIECITIGGKWTATHESVEPPRGTAMA---IDMSDGYVWEYLYTIPPDVSINRCTNEHIVVPFPDELSDDPARWGYENAILWYPDKLDLIYRVKVDTLRFRAYMDSIYFPEASLPGNTGFRQMSVIINPLVKKSLPSDPDVKATLIACKPEELEKDSGEMIYMENRQPITRALDQTEEINIIFSF : UniRef90_E1A1H6
UniRef90_I6X7Y3     : IYRAMVTSDFRVANLLNFYSLIGDGNTQNTLYAYFGRSEAWADNESDPKFAPPYPDDTSEGYSDIWSRMLGAVKIQKELIRPVVPRKDWGDQRYADPYTFHIGDIVVTNSAPYNTTEIGSGWMVYRCVDVPSDGMCSIQTIKDKEECLKVGGKWTPSIFSILPI-GRSDG---VNMQDGYIWEYLYTIPTDVAINDCSNEYIVVPTPDELKTSPDVWGYQHVITWYPNDYNLIGRIKCNTLRFRSYFDSYNFPASSKIGNTGFRQMGIINNPLLVKNTPADPDVKATALSYDPSQLERHSGNVIYMDNRQPVIRSRDQTEEFNVVFSF : UniRef90_I6X7Y3
UniRef90_E1A293     : IYRSIVTNKFRTENLLNFYNSIGDEAGKHTIYTTFGRPDKWADNETDSKFAPPYPDDSVEGIADVWSRMLGAVKIQQEMLRPVVPRDDWGDQRYSDPFTHHIGDIVVTNSAPYNRTEIGSGWMVYRCVDVPEVGQCSIKTITEKGACMKIGGKWTPSRESLLPV-GKSDG---VDMKDGYIWEYLYTIPPDVAINECTNEHIVVPTPQELIANPTRWGYQHVLKWYPAKYDVIFRMKCHTLRFRAYIDSIYFKEASMVGNKGFRQLSVILDPILTKSNPAAADVKATAANYLPSQLERHSGEMIYMENRQPIIRSRDQTEEFNLIFEF : UniRef90_E1A293
UniRef90_A0A023W6N5 : VYRAIVTSKFRTEKMLNFYEMVGDTKDKNTIYMTFGRSTPWAANEKDPGFAPPYPIDNPDGVSDMWQHMLGTLKIDKSMLDAVVPRRDWGDTRYQNPYTFYIGDIVVIGSIGENTTYNAPGWKVYRCVDVPDVGECSITSIKEKKECIALGGKWTPGVRSDQFPDSKADGSAL---SDGYTWEYLYTIPYDVTINRCTNEYIVVPMPDELREKRQRWGYDNNISWNPQDSDLLYNMKVNTIRFKAFMDSIYFPEASLPGNTGFRQISLIVNPLEKKKSPSDKDVKATKVAYKPQQLELHSGEMIYMENRQPIIRSMDATEEISIIFQF : UniRef90_A0A023W6N5
UniRef90_Q6WHG1     : IYRSTITTEYRVNNLMNFYENVGDEDDKNTIYLMFGRNEPWSDREDEINFAPPYPNDSPDGKADVWARALGLIKIPKSQLRPVLPRKDWGDPDLNNSLRFTFGDIVTVNTMPINSHPSALGYMVYRCIDIPETGTCSIATVTNKNDCVAVGGEWAPSSPQENIPHGTGNA---IETGDGYVWEYLYTIPPSEVLTNVTQEYIVCPFPEDIIADRVAWGLDQNIVFNENYDETIYSVGAVQLRFRAKLAGADFIHLFGPGNQGYRQISLVQNPLLVREEGATSDTKATETRYDPHEIQAGTGQIIYMENRQPIRKTLDQVEEFNLIYNF : UniRef90_Q6WHG1
UniRef90_E3SIZ2     : ---AIITDQIRILNAKNFVSGITSSA--NSYYSFIGLPNP-SDYQDDWDSNPPAPKDNFSQENDYWDTMVALKKINSGDVRQVIPKRTWTSGTTYDMYRH---DYSVTNTA----AVSGATNLYSAFYYVMNSDFRVYACLQNGTDPNNPNGKPSLDEPTFTDLEPRSAGS----SGDGYLWKYLYTIKPNEVVKFESTDFMPVP--------------------------------------------------------------------------------------------------------------------------- : UniRef90_E3SIZ2
UniRef90_M1T2J6     : ---ALLTDQFRIFTAQKFIKSLEAGDDRDRLYIFIGRPQEW-DNEN----SPPQAVDSFDEFSDAYDDMMSLKRVLAADTIQVVRRIDW---IPPEQTTGGLGDMYRHDYSPTNTASSGATKLY-------DSDFYVVNSNYQVYKCIYNGTSPSDPNGKPSTIEPTGTSTSIITTADGYRWKYVYTIPVAQVLKFFSADYMPVFSDASITSNAVAGEIDTVI--------------------------------------------------------------------------------------------------------- : UniRef90_M1T2J6
UniRef90_I3UL97     : ---AILTDQFRIFSAEQFIRSLQAGDKRTRMYAFIGRPQPW-ENEN----TPPDPVDSFNEFSDAFDDMIALKRILASDVVQVVRRIDWSP---PEETTGGIGDMYKNDYSASKTASSGATRLY-------DADFYVVNSSFNVYKCIYNGTSPADPNGRPSTVEPTGTSTSIITTSDGYRWKYLFTIPVNDVLKFFSNDYMPVLTDPVVSAAAVNGSIDTVL--------------------------------------------------------------------------------------------------------- : UniRef90_I3UL97
UniRef90_D6PHT5     : ---AIITDQLRILNAKNFVNSVRDSN--NSYYSFIGLPNPFDYDSN-WNVNPPAPKDNGDEENDYWDTIIAVKKIGNDDVRHVVRKIIWTRENVYDMYRNDISRNRISNSSSSSSI-------YASNFYVLNEDYRVYICLNNGTDPEHPNGRPSLDQPTFTDLEPKAAG----LSGDGYIWKYLYTIKPSEIIKFDSTNYIPVP--------------------------------------------------------------------------------------------------------------------------- : UniRef90_D6PHT5
UniRef90_E3SL22     : ---AIISEQFRILNAETFVQSVGVGSTVNKYYAFMGLPEPKAGGTATWATNTPSPLDGFEEEYSIKESIIAMKKVTDKDVRRLVRKVSWVAGTTYEMYRHDYN--------IYNLTPITSGSLYDANYYVVNEDLKVYICLQNGSDPENPKGRPSYDQPTFVDLEPRAAGT----SGDGYVWKYLYTIKPSEIVKFDSIEYIPVP--------------------------------------------------------------------------------------------------------------------------- : UniRef90_E3SL22
UniRef90_M1IP75     : ---AIITKDFRIQNANQFKESFDESAD--TYYLAIGRPQAFANDQDGTDTSPPTPVDSVGSVYYVYDDLMSAKKITSSNVSAVIPRRNWTTGTTYDYYRHDYGEINSAGSAI--AANSGATTL-------HDATFYVMNSTFDVYKCIDNNGD---SASTVEPTGNK--TTSVFSTGDSYKWKYMYTLTASEQANFMSTDFI------------------------------------------------------------------------------------------------------------------------------ : UniRef90_M1IP75
UniRef90_E3SMR9     : ---ALVTDNFRIYAAESFRNTLQAT---NKVYMFVGRAKTWGSSDV-----PPTPLDSFEYARTSYGDSVAFKRVDISDTALVIPRVDWTD---PTKTTGGVGRMYKPDYAPTKTTANGSSRLY-------DSNFYVMNSDFNVYKCLYNGQSPEFPRGRPSLVEPTGTSTTIIETSDSYRWKYLYTIDADNILKFVTSEFIPV---------------------------------------------------------------------------------------------------------------------------- : UniRef90_E3SMR9
UniRef90_Q58MP2     : ---AIVTDQFRILNANNFVESVES--DKNAYYVFIGLSNPTGTPSSDWNNSTPKPLDSFSSTAHVGDTMMFGKRIASANIRRIVRRIDWTAGKRYEMYRD---DYSTEAGAQSPINDSS--RLYGASYYVMNSEFKVYICISNGSSGDNPTGNISQDEPMFTDLEPSRAGT----SGDGYVWKYLYTVSPADILKFDSTEYITVPNNWSTSTDAQ----------------------------------------------------------------------------------------------------------------- : UniRef90_Q58MP2
UniRef90_F5B3M8     : ------SNDMRINNAKRLLDSLGPGPNFDAYYLGIGRPLPWSDDPSIDDSNPPTYKNNTQDFNNFYYQLISLKRLNDVYGYTMASKYTWSSGIVYDMYRHD--------YSSKNSAVSGATDLY-------DARFYVVTSTFDVYICLYNGVTPTNTTGNVSTVEPIGNNPEPFETSDGYIWLYIYTIPQN-IREFITTNHIPIPTPGEI---------------------------------------------------------------------------------------------------------------------- : UniRef90_F5B3M8
UniRef90_M4QTG0     : ---AFVTDQFRILNAGSFVESISN----NSYYAFLGLSNPTSPDPRDPNWNTSTPVDNFEYLSHYRDTSLFGKKITSENARRVIRKVEWVANTPYDMYRHDYSKTVRLYDANYYVLTSE--FKVYICIDNGS-------STPDGNDPTVTGSTIEPTQTDVEPS---------VAGSDGYRWKYLFSISPSDVIKFDSTEYITVP--------------------------------------------------------------------------------------------------------------------------- : UniRef90_M4QTG0
UniRef90_C7BVB8     : ---------------------------------------------------PPLPLDNQREKIALYDEIIAAKRITDSFARTVVRRYNWNLVANPDMWKPD-----------YSATPGGGGQIGKQTASISDAKFYVMNSTYEVFKCLYNGGNPTGVDAVEEPTTGTGLYTETTNVNGNYIWKYMYTIPTDDVLKFLSSDFMPIVLP----ANPSR---------------------------------------------------------------------------------------------------------------- : UniRef90_C7BVB8
UniRef90_V5USJ2     : ---------------------------------------------------PPLPLDNQTEKFEVYDDVIAAKRITSEFARAVIRRYNWDLVANPDMYKPD-----------YSGTPAGGGQLGKASTSIADAKFYVMNSTYEVFKCLYNGGQNATEEPSTT-SGNYANGIYTEASGAGYVWKYLFTLPTDDVLRFLSSDFMPIV----LSNNATRVATQN----------------------------------------------------------------------------------------------------------- : UniRef90_V5USJ2
UniRef90_D6PI92     : --------------------------------------------------APPAPLDNYSEKLAIYNELIAAKRVTGPFARLVVPRYNWNLTLNPKF------DMYRPNYSPTPGGGGSVGKDTATGQSSLSEGFYVMNQQYEVFKCLYNGGQNATYEPKSQPSPGQGAFANGIYTTAGYIWKHMFTVPTGDVLAFLSTDFMPVVESTEL---------------------------------------------------------------------------------------------------------------------- : UniRef90_D6PI92
UniRef90_Q5GQX0     : ---------------------------------------------------PPVPLDNQREKFDVYDDIIAAKRITSQFVRPVVTRYDWNLVATEKRFDMFKPDYSVAGRVGKSSTTGASA--------LGDAKYYVVNANYEVFKCLYNGGQVDPD-PVYEPKTNPSGGEGTYNPSSGYVWKYMYTIPTEDVLRFLSTNFMSI----NLAGEPTRAGTE------------------------------------------------------------------------------------------------------------ : UniRef90_Q5GQX0
UniRef90_E3SPI1     : ---------------------------------------------------PPTPLDNQIEKFSVYDEIIAAKRITDQFARAVITRYDWNLLATEPRF-----DMYKPDYSATTTGQVGK-QSTTGAASLGASKFYVINSNYEVFKCLYNGGQVDPNEPKTTPSAGQGAGSGLFTAGSGYIWKYMYTIPTDDVLRFLSTNFMPI---------------------------------------------------------------------------------------------------------------------------- : UniRef90_E3SPI1
UniRef90_S5M6T0     : ---SLVTEKARVMTAVRMRDSFQSNNLLNH-YMVAAKHVPFDDDNN-----PPMPVNSDDQYYDMARDIIFGKKITPDDVATAIKNYTWQSGTIYTAYDDKDGDLYKKKF--YAITKEGAEYSVFKCLY-------------------NNKGKPS----TFQPKKSETNADELYLTNDGYIWKLLYSVSENQYKKFIGQDVFPCFANPDATENAV----------------------------------------------------------------------------------------------------------------- : UniRef90_S5M6T0

                    : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271-------281-------291-------301-------311-------321----- :
OrigSeq             : IYRAIVTSKFRTEKMLNFYNSIGSGPDKNTIFITFGRSEPWSSNENEVGFAPPYPTDSVLGVTDMWTHMMGTVKVLPSMLDAVIPRRDWGDTRYPDPYTFRINDIVVCNSAPYNATESGAGWLVYRCLDVPDTGMCSIASLTDKDECLKLGGKWTPSARSMTPPEGRGDAEGTIEPGDGYVWEYLFEIPPDVSINRCTNEYIVVPWPEELKEDPTRWGYEDNLTWQQDDFGLIYRVKANTIRFKAYLDSVYFPEAALPGNKGFRQISIITNPLEAKAHPNDPNVKAEKDYYDPEDLMRHSGEMIYMENRPPIIMAMDQTEEINILFTF : OrigSeq

Jnet                : --HHH---HHHHHHHHHHHHH-------EEEEEEEE-----------------------HHHHHHHHHHHHH--------EEEEE-------------------EEE--------------EEEEEEEE-----EEEEEE--------------------------------EEE----EEEEEEEE-----HHHH----EEEEE------H----------EEEE-----EEEEEEEEEEEHHHHH----------------EEEEEE--HHHH---------EE---------------EEEEE-----HHH-----HHEEEEE-- : Jnet
jhmm                : --HHHH--HHHHHHHHHHHHH-------EEEEEEEE-----------------------HHHHHHHHHHHHHE-------EEEEEEE-----------------EEE---------------EEEEEEE-----EEEEEE--------------------EE----------EEE----EEEEEEEE-----HHHH----EEEE-------H-HH-------EEEE----EEEEEEEEEEEEEHHHH-----HHH--------EEEEEE--HHHH--------------------------EEEEE-----HHHHHHHHHHHEEE--- : jhmm
jpssm               : --------HHHHHHHHHHHHH-------EEEEEEEE----------------------HHHHHHHHHHHHHHH---------EEE-------------------EEEE-------------EEEEEEEE------EEEEE---------------------------------------EEEEEEEE----HHHHH-----EEEE-------------------EE-----EEEEEEEEEEEHHHHH----------------EEEEEHH-HHHH---------EEEE--------------EEEE-----EEE------EEEEEE-- : jpssm

Lupas 14            : ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21            : ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28            : ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25             : --BBBB---BBB-BB--BB-BB------BBBBBBBBB---BB-------BBBB-B-B---BBB-BB--BBBBB-B---BB--BB----B--------B---B--BBB---B-B-BB--BB--BBB-BBBBB---BBBBBBB-----B----B----------B------B--BB---BBBBBBBBB-B----BB-BBB--BBBBBB---B---B--BBB--BB-B----B-BBB-B-B-BBBBBBBBBBB-BB-BBB----BBBBBBBB-BBB------------B----B----B---BB-BBBB-----B--BB-----B-BBB-- : Jnet_25
Jnet_5              : ---------B----B--B------------BBBBBB------------------B---------B---BBBB--B----B--BB--------------------B-----B------------B--B---------BB-----------------------------------------B-B--B----------------BBBB-----------------B--------BBB-B-B--B-B-B-B------------------B--B---------------------------------BB-B-----B-----------B---- : Jnet_5
Jnet_0              : ---B-------------B------------B-B-----------------------------------B-B-----------B-------------------------------------------B---------B-------------------------------------------------------------------B---------------------------B----B------------------------------------------------------------------------------------------ : Jnet_0
Jnet Rel            : 9322206668999999999851688886168888615777766777777777777764145899999998630157555403222136777667766677776346514677766677775068888863788816888536775115677654566777227777777776022577606888861573114431478636870377521021124677751332057601788988887403332146772124567777512320221144225787776211023435556677776147853777310121121203887179 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.