SILENT_MODE BLOCK_FILE jp_0ipMqQY.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_0ipMqQY.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 335 16 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 17 335 26 H SPACE SUB_CHARS 1 17 335 26 E SPACE SUB_CHARS 1 17 335 26 - SPACE STRAND 73 20 77 COLOUR_TEXT_REGION 73 20 77 20 51 STRAND 84 20 86 COLOUR_TEXT_REGION 84 20 86 20 51 STRAND 121 20 121 COLOUR_TEXT_REGION 121 20 121 20 51 STRAND 297 20 297 COLOUR_TEXT_REGION 297 20 297 20 51 STRAND 308 20 312 COLOUR_TEXT_REGION 308 20 312 20 51 HELIX 24 20 34 COLOUR_TEXT_REGION 24 20 34 20 50 HELIX 47 20 65 COLOUR_TEXT_REGION 47 20 65 20 50 HELIX 87 20 88 COLOUR_TEXT_REGION 87 20 88 20 50 HELIX 102 20 120 COLOUR_TEXT_REGION 102 20 120 20 50 HELIX 133 20 145 COLOUR_TEXT_REGION 133 20 145 20 50 HELIX 154 20 158 COLOUR_TEXT_REGION 154 20 158 20 50 HELIX 165 20 171 COLOUR_TEXT_REGION 165 20 171 20 50 HELIX 175 20 184 COLOUR_TEXT_REGION 175 20 184 20 50 HELIX 190 20 203 COLOUR_TEXT_REGION 190 20 203 20 50 HELIX 209 20 219 COLOUR_TEXT_REGION 209 20 219 20 50 HELIX 224 20 233 COLOUR_TEXT_REGION 224 20 233 20 50 HELIX 235 20 250 COLOUR_TEXT_REGION 235 20 250 20 50 HELIX 252 20 256 COLOUR_TEXT_REGION 252 20 256 20 50 HELIX 274 20 286 COLOUR_TEXT_REGION 274 20 286 20 50 HELIX 320 20 328 COLOUR_TEXT_REGION 320 20 328 20 50 STRAND 73 25 76 COLOUR_TEXT_REGION 73 25 76 25 51 STRAND 84 25 84 COLOUR_TEXT_REGION 84 25 84 25 51 STRAND 119 25 122 COLOUR_TEXT_REGION 119 25 122 25 51 STRAND 308 25 312 COLOUR_TEXT_REGION 308 25 312 25 51 HELIX 24 25 33 COLOUR_TEXT_REGION 24 25 33 25 50 HELIX 47 25 65 COLOUR_TEXT_REGION 47 25 65 25 50 HELIX 85 25 91 COLOUR_TEXT_REGION 85 25 91 25 50 HELIX 102 25 117 COLOUR_TEXT_REGION 102 25 117 25 50 HELIX 133 25 144 COLOUR_TEXT_REGION 133 25 144 25 50 HELIX 153 25 159 COLOUR_TEXT_REGION 153 25 159 25 50 HELIX 165 25 171 COLOUR_TEXT_REGION 165 25 171 25 50 HELIX 174 25 184 COLOUR_TEXT_REGION 174 25 184 25 50 HELIX 190 25 203 COLOUR_TEXT_REGION 190 25 203 25 50 HELIX 209 25 219 COLOUR_TEXT_REGION 209 25 219 25 50 HELIX 222 25 223 COLOUR_TEXT_REGION 222 25 223 25 50 HELIX 225 25 227 COLOUR_TEXT_REGION 225 25 227 25 50 HELIX 232 25 232 COLOUR_TEXT_REGION 232 25 232 25 50 HELIX 235 25 249 COLOUR_TEXT_REGION 235 25 249 25 50 HELIX 252 25 255 COLOUR_TEXT_REGION 252 25 255 25 50 HELIX 275 25 286 COLOUR_TEXT_REGION 275 25 286 25 50 HELIX 320 25 327 COLOUR_TEXT_REGION 320 25 327 25 50 STRAND 73 26 78 COLOUR_TEXT_REGION 73 26 78 26 51 STRAND 84 26 87 COLOUR_TEXT_REGION 84 26 87 26 51 STRAND 295 26 297 COLOUR_TEXT_REGION 295 26 297 26 51 STRAND 308 26 311 COLOUR_TEXT_REGION 308 26 311 26 51 HELIX 23 26 39 COLOUR_TEXT_REGION 23 26 39 26 50 HELIX 47 26 56 COLOUR_TEXT_REGION 47 26 56 26 50 HELIX 58 26 64 COLOUR_TEXT_REGION 58 26 64 26 50 HELIX 102 26 121 COLOUR_TEXT_REGION 102 26 121 26 50 HELIX 128 26 128 COLOUR_TEXT_REGION 128 26 128 26 50 HELIX 133 26 145 COLOUR_TEXT_REGION 133 26 145 26 50 HELIX 165 26 171 COLOUR_TEXT_REGION 165 26 171 26 50 HELIX 175 26 184 COLOUR_TEXT_REGION 175 26 184 26 50 HELIX 190 26 203 COLOUR_TEXT_REGION 190 26 203 26 50 HELIX 208 26 219 COLOUR_TEXT_REGION 208 26 219 26 50 HELIX 224 26 250 COLOUR_TEXT_REGION 224 26 250 26 50 HELIX 252 26 256 COLOUR_TEXT_REGION 252 26 256 26 50 HELIX 274 26 285 COLOUR_TEXT_REGION 274 26 285 26 50 HELIX 298 26 300 COLOUR_TEXT_REGION 298 26 300 26 50 HELIX 302 26 303 COLOUR_TEXT_REGION 302 26 303 26 50 HELIX 320 26 329 COLOUR_TEXT_REGION 320 26 329 26 50