SILENT_MODE BLOCK_FILE jp_K_h4Q6N.concise.blc MAX_NSEQ 97 MAX_INPUT_LEN 99 OUTPUT_FILE jp_K_h4Q6N.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 67 86 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 87 67 96 H SPACE SUB_CHARS 1 87 67 96 E SPACE SUB_CHARS 1 87 67 96 - SPACE HELIX 3 90 16 COLOUR_TEXT_REGION 3 90 16 90 50 HELIX 27 90 37 COLOUR_TEXT_REGION 27 90 37 90 50 HELIX 42 90 55 COLOUR_TEXT_REGION 42 90 55 90 50 HELIX 3 95 16 COLOUR_TEXT_REGION 3 95 16 95 50 HELIX 25 95 37 COLOUR_TEXT_REGION 25 95 37 95 50 HELIX 42 95 55 COLOUR_TEXT_REGION 42 95 55 95 50 HELIX 62 95 64 COLOUR_TEXT_REGION 62 95 64 95 50 HELIX 3 96 16 COLOUR_TEXT_REGION 3 96 16 96 50 HELIX 28 96 37 COLOUR_TEXT_REGION 28 96 37 96 50 HELIX 42 96 54 COLOUR_TEXT_REGION 42 96 54 96 50