SILENT_MODE BLOCK_FILE jp_83rYVHz.concise.blc MAX_NSEQ 603 MAX_INPUT_LEN 605 OUTPUT_FILE jp_83rYVHz.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 184 592 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 593 184 602 H SPACE SUB_CHARS 1 593 184 602 E SPACE SUB_CHARS 1 593 184 602 - SPACE HELIX 2 596 35 COLOUR_TEXT_REGION 2 596 35 596 50 HELIX 46 596 51 COLOUR_TEXT_REGION 46 596 51 596 50 HELIX 55 596 73 COLOUR_TEXT_REGION 55 596 73 596 50 HELIX 83 596 89 COLOUR_TEXT_REGION 83 596 89 596 50 HELIX 96 596 120 COLOUR_TEXT_REGION 96 596 120 596 50 HELIX 137 596 152 COLOUR_TEXT_REGION 137 596 152 596 50 HELIX 159 596 182 COLOUR_TEXT_REGION 159 596 182 596 50 STRAND 136 601 139 COLOUR_TEXT_REGION 136 601 139 601 51 HELIX 2 601 35 COLOUR_TEXT_REGION 2 601 35 601 50 HELIX 47 601 51 COLOUR_TEXT_REGION 47 601 51 601 50 HELIX 55 601 73 COLOUR_TEXT_REGION 55 601 73 601 50 HELIX 83 601 91 COLOUR_TEXT_REGION 83 601 91 601 50 HELIX 95 601 121 COLOUR_TEXT_REGION 95 601 121 601 50 HELIX 143 601 152 COLOUR_TEXT_REGION 143 601 152 601 50 HELIX 159 601 182 COLOUR_TEXT_REGION 159 601 182 601 50 STRAND 83 602 85 COLOUR_TEXT_REGION 83 602 85 602 51 STRAND 97 602 99 COLOUR_TEXT_REGION 97 602 99 602 51 HELIX 2 602 34 COLOUR_TEXT_REGION 2 602 34 602 50 HELIX 44 602 51 COLOUR_TEXT_REGION 44 602 51 602 50 HELIX 56 602 60 COLOUR_TEXT_REGION 56 602 60 602 50 HELIX 66 602 72 COLOUR_TEXT_REGION 66 602 72 602 50 HELIX 104 602 104 COLOUR_TEXT_REGION 104 602 104 602 50 HELIX 130 602 135 COLOUR_TEXT_REGION 130 602 135 602 50 HELIX 137 602 152 COLOUR_TEXT_REGION 137 602 152 602 50 HELIX 159 602 182 COLOUR_TEXT_REGION 159 602 182 602 50