SILENT_MODE BLOCK_FILE jp_asrmdvx.concise.blc MAX_NSEQ 555 MAX_INPUT_LEN 557 OUTPUT_FILE jp_asrmdvx.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 469 544 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 545 469 554 H SPACE SUB_CHARS 1 545 469 554 E SPACE SUB_CHARS 1 545 469 554 - SPACE STRAND 21 548 24 COLOUR_TEXT_REGION 21 548 24 548 51 STRAND 29 548 32 COLOUR_TEXT_REGION 29 548 32 548 51 STRAND 378 548 381 COLOUR_TEXT_REGION 378 548 381 548 51 HELIX 35 548 43 COLOUR_TEXT_REGION 35 548 43 548 50 HELIX 50 548 61 COLOUR_TEXT_REGION 50 548 61 548 50 HELIX 66 548 77 COLOUR_TEXT_REGION 66 548 77 548 50 HELIX 90 548 109 COLOUR_TEXT_REGION 90 548 109 548 50 HELIX 112 548 128 COLOUR_TEXT_REGION 112 548 128 548 50 HELIX 136 548 149 COLOUR_TEXT_REGION 136 548 149 548 50 HELIX 158 548 167 COLOUR_TEXT_REGION 158 548 167 548 50 HELIX 204 548 219 COLOUR_TEXT_REGION 204 548 219 548 50 HELIX 224 548 230 COLOUR_TEXT_REGION 224 548 230 548 50 HELIX 242 548 261 COLOUR_TEXT_REGION 242 548 261 548 50 HELIX 268 548 288 COLOUR_TEXT_REGION 268 548 288 548 50 HELIX 292 548 300 COLOUR_TEXT_REGION 292 548 300 548 50 HELIX 306 548 313 COLOUR_TEXT_REGION 306 548 313 548 50 HELIX 318 548 329 COLOUR_TEXT_REGION 318 548 329 548 50 HELIX 335 548 343 COLOUR_TEXT_REGION 335 548 343 548 50 HELIX 359 548 363 COLOUR_TEXT_REGION 359 548 363 548 50 HELIX 382 548 399 COLOUR_TEXT_REGION 382 548 399 548 50 HELIX 408 548 420 COLOUR_TEXT_REGION 408 548 420 548 50 HELIX 428 548 439 COLOUR_TEXT_REGION 428 548 439 548 50 STRAND 21 553 24 COLOUR_TEXT_REGION 21 553 24 553 51 STRAND 29 553 32 COLOUR_TEXT_REGION 29 553 32 553 51 STRAND 351 553 353 COLOUR_TEXT_REGION 351 553 353 553 51 STRAND 361 553 362 COLOUR_TEXT_REGION 361 553 362 553 51 STRAND 379 553 381 COLOUR_TEXT_REGION 379 553 381 553 51 HELIX 35 553 43 COLOUR_TEXT_REGION 35 553 43 553 50 HELIX 50 553 60 COLOUR_TEXT_REGION 50 553 60 553 50 HELIX 66 553 77 COLOUR_TEXT_REGION 66 553 77 553 50 HELIX 90 553 98 COLOUR_TEXT_REGION 90 553 98 553 50 HELIX 100 553 109 COLOUR_TEXT_REGION 100 553 109 553 50 HELIX 111 553 128 COLOUR_TEXT_REGION 111 553 128 553 50 HELIX 136 553 150 COLOUR_TEXT_REGION 136 553 150 553 50 HELIX 158 553 167 COLOUR_TEXT_REGION 158 553 167 553 50 HELIX 204 553 220 COLOUR_TEXT_REGION 204 553 220 553 50 HELIX 224 553 229 COLOUR_TEXT_REGION 224 553 229 553 50 HELIX 242 553 262 COLOUR_TEXT_REGION 242 553 262 553 50 HELIX 268 553 288 COLOUR_TEXT_REGION 268 553 288 553 50 HELIX 291 553 301 COLOUR_TEXT_REGION 291 553 301 553 50 HELIX 306 553 314 COLOUR_TEXT_REGION 306 553 314 553 50 HELIX 318 553 328 COLOUR_TEXT_REGION 318 553 328 553 50 HELIX 335 553 343 COLOUR_TEXT_REGION 335 553 343 553 50 HELIX 355 553 357 COLOUR_TEXT_REGION 355 553 357 553 50 HELIX 359 553 360 COLOUR_TEXT_REGION 359 553 360 553 50 HELIX 382 553 399 COLOUR_TEXT_REGION 382 553 399 553 50 HELIX 408 553 420 COLOUR_TEXT_REGION 408 553 420 553 50 HELIX 429 553 439 COLOUR_TEXT_REGION 429 553 439 553 50 STRAND 21 554 24 COLOUR_TEXT_REGION 21 554 24 554 51 STRAND 29 554 32 COLOUR_TEXT_REGION 29 554 32 554 51 STRAND 197 554 200 COLOUR_TEXT_REGION 197 554 200 554 51 STRAND 377 554 382 COLOUR_TEXT_REGION 377 554 382 554 51 HELIX 35 554 43 COLOUR_TEXT_REGION 35 554 43 554 50 HELIX 51 554 61 COLOUR_TEXT_REGION 51 554 61 554 50 HELIX 67 554 77 COLOUR_TEXT_REGION 67 554 77 554 50 HELIX 88 554 91 COLOUR_TEXT_REGION 88 554 91 554 50 HELIX 95 554 109 COLOUR_TEXT_REGION 95 554 109 554 50 HELIX 117 554 128 COLOUR_TEXT_REGION 117 554 128 554 50 HELIX 138 554 149 COLOUR_TEXT_REGION 138 554 149 554 50 HELIX 163 554 167 COLOUR_TEXT_REGION 163 554 167 554 50 HELIX 204 554 219 COLOUR_TEXT_REGION 204 554 219 554 50 HELIX 225 554 230 COLOUR_TEXT_REGION 225 554 230 554 50 HELIX 241 554 261 COLOUR_TEXT_REGION 241 554 261 554 50 HELIX 268 554 278 COLOUR_TEXT_REGION 268 554 278 554 50 HELIX 280 554 288 COLOUR_TEXT_REGION 280 554 288 554 50 HELIX 294 554 299 COLOUR_TEXT_REGION 294 554 299 554 50 HELIX 306 554 312 COLOUR_TEXT_REGION 306 554 312 554 50 HELIX 318 554 333 COLOUR_TEXT_REGION 318 554 333 554 50 HELIX 359 554 364 COLOUR_TEXT_REGION 359 554 364 554 50 HELIX 384 554 399 COLOUR_TEXT_REGION 384 554 399 554 50 HELIX 410 554 419 COLOUR_TEXT_REGION 410 554 419 554 50 HELIX 427 554 439 COLOUR_TEXT_REGION 427 554 439 554 50