SILENT_MODE
BLOCK_FILE jp_3HOvxdz.concise.blc
MAX_NSEQ 208
MAX_INPUT_LEN 210
OUTPUT_FILE jp_3HOvxdz.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 112 197   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 198 112 207 H SPACE
SUB_CHARS 1 198 112 207 E SPACE
SUB_CHARS 1 198 112 207 - SPACE
HELIX 9 201 29
COLOUR_TEXT_REGION 9 201 29 201 50
HELIX 34 201 42
COLOUR_TEXT_REGION 34 201 42 201 50
HELIX 45 201 58
COLOUR_TEXT_REGION 45 201 58 201 50
HELIX 64 201 86
COLOUR_TEXT_REGION 64 201 86 201 50
HELIX 90 201 110
COLOUR_TEXT_REGION 90 201 110 201 50
HELIX 9 206 20
COLOUR_TEXT_REGION 9 206 20 206 50
HELIX 22 206 30
COLOUR_TEXT_REGION 22 206 30 206 50
HELIX 34 206 41
COLOUR_TEXT_REGION 34 206 41 206 50
HELIX 45 206 58
COLOUR_TEXT_REGION 45 206 58 206 50
HELIX 64 206 87
COLOUR_TEXT_REGION 64 206 87 206 50
HELIX 90 206 110
COLOUR_TEXT_REGION 90 206 110 206 50
HELIX 8 207 28
COLOUR_TEXT_REGION 8 207 28 207 50
HELIX 34 207 57
COLOUR_TEXT_REGION 34 207 57 207 50
HELIX 64 207 86
COLOUR_TEXT_REGION 64 207 86 207 50
HELIX 90 207 110
COLOUR_TEXT_REGION 90 207 110 207 50