Jpred secondary structure prediction results

QUERY           : ILEILYYKKGKEFGILEKKMKEIFNETGVSLEPVNSELIGRIFLKISVLEEGEEVPSFAIKALTPKENAVDLPLGDWTDLKNVFVEEIDYLDSYGDMKILSEKNWYKIYVPYSSVKKKNRNELVEEFMKYFFESKGWNPGEYTFSVQEI : QUERY 
UniRef90_B9KA93 : -LEIFYRRKDKDTRDLERKIREILRETGITLDVVNSESAGRIFLRINVLEDQEQIPSFILKALIPETDATRLPLGEWATL-NVFVEEASYLEDYDYMKIHSDGNRYTLYVPYSAVKSKNRDEVVADFMKYFFETKGWDPGNYEFFVQEV : UniRef90_B9KA93

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141------ :
OrigSeq         : ILEILYYKKGKEFGILEKKMKEIFNETGVSLEPVNSELIGRIFLKISVLEEGEEVPSFAIKALTPKENAVDLPLGDWTDLKNVFVEEIDYLDSYGDMKILSEKNWYKIYVPYSSVKKKNRNELVEEFMKYFFESKGWNPGEYTFSVQEI : OrigSeq

Jnet            : --EEHHH------HHHHHHHHHHHHH----EE--------EEEEEEEEE-------HHHHHH-------------------HHHHHH---------EEEEE---EEEEEE---------HHHHHHHHHHHHHH--------EEEEEE-- : Jnet
jhmm            : --HHHHHH-----HHHHHHHHHHHHH--------------EEEEEEEEE-------HHHHHH--------------------EEHHHHH-------EEEEE---EEEEEE---------HHHHHHHHHHHHHH--------EEEEEE-- : jhmm
jpssm           : --EEEE-------HHHHHHHHHHHH----EEEE-----HHEEEEEEEE--------HHHHHE-----------------HHHHHHH----------EEEEE---EEEEEEE--------HHHHHHHHHHHHHH--------EEEEE--- : jpssm

Lupas 14        : ----------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21        : ----------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28        : ----------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25         : -B-BBBB-----B--B---B--BB--B-B-B--B---BBBBBBBBB-BB-----BB-BBB-BBB----BB-BBBB-B--B--BBB-BB-BB--B--B-BB-----BBBBBBB--B----B--BB--BB-BBB-B--B----B-BBB--- : Jnet_25
Jnet_5          : ---B---------------B---------------------B-B-B-B------B---BB-------------------B--BB---B--------B-B--------B-B------------BB--BB-----------------B--- : Jnet_5
Jnet_0          : -------------------B---------------------------------------------------------------------------------------B-B--------------------------------------- : Jnet_0
Jnet Rel        : 84111212887637899999998851786211046222121357788517787610233213157777546777775211112240202357787368871686589986157677764289999999998742678887506886389 : Jnet Rel


Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.