QUERY           : ESPHDLVVDTVGTGYHSRFGSDAEASVMLKRADGSELSHREFIDYVMNFNTVRYDYYGDDASYTNLMASYGTKHSADSWWKTGRVPRISCGINYGFDRFKGSGPGYYRLTLIANGYRDVVADVRFL : QUERY 
UniRef90_R6BNT1 : -------VDETKIVKTVRSADDAETYGAFIRVD---LTGDAYGDLGANMQTVRWDYYGNDSTYTNKLATYGTKFAADNWMQLGLTKSLRCQLPEGTD-----GTGYWKVTVYALGYQDYTFEVQ-- : UniRef90_R6BNT1
UniRef90_G1WM41 : --------------IQLKTATDLEP--TVKEGDGSFGEFGDYGDLGANMQAVKWTYYGDDATYTNAKASYGTKFAADNWMQLGLTDSVRCQLPSGTD-----GTGYWSLTIYALGYEDYTYTFQV- : UniRef90_G1WM41
UniRef90_R6GB89 : ---------------TLKTADLNNMGATVKDASGSYGEFKNYGDLGANMQAVKWTYYGNDSTRSKALATYGTKFAADNWMQLGLTNSIRCQLPKGYD-----GTGYWSLTIYALGYADSTYNFE-- : UniRef90_R6GB89
UniRef90_R5Z7T8 : --------EATGVTPNLRSGDAVGSYGETLRLD----LNGDYGDLGANLQSVKWTFYGDDSTYTTPVKTYGTKFAADNWMHKSMGIQLGLTESARFDLSGNAAVGYWSVTVSALGYKDYTYKF--- : UniRef90_R5Z7T8
UniRef90_D4LQB5 : ----------TADGITTKMKPGSGSYGEFLRVDLT----GNYGGLGGAMQAVKWTYYGDDDTYSNALQSYGTKFAADNWMQLGLTDSVRCKLPADTD-----GTGYWEVTVYGLGYSDYTFRFQ-- : UniRef90_D4LQB5
UniRef90_D4MVX7 : ---------AVKITPTVKAAS--GSYGEFLRVD---LNGDDYSALGDKMQAVKWTYYGNDSTRTKALASYGTKFAADNWMQLGLTDSIRCQLPENTD-----GTGYWSLTVYALGYEDYTVNFE-- : UniRef90_D4MVX7
UniRef90_R7GV25 : ----------TATEIKPSVKAASGSYGEFLRVD----LNGNYGDLGANMQAVRWDYYGDDSTYTKCLASYGTKFAADNWMQLGLTKSARCKLPGGTD-----GTGYWKLTVYALGYNDYTYSFQ-- : UniRef90_R7GV25
UniRef90_R6LRK9 : ---------AADITPNVRETKDVGSFGEFIRVD----LNGNYGGLGSAMQAVEWTYYGDDASYTTPVRTFGTKFAADNWMQLGLTDSLRCQLPEGTD-----GTGYWKLTVYGLGYADYSYSFKI- : UniRef90_R6LRK9
UniRef90_C7G565 : ----------TAENITTTVKEANGSYGEFLRVD---LTGEGYGALGADMQAVEWTYYGSDSTYTDPLQSYGTKFASDNWMQLGLTDSLRCKLPAGTD-----GTGYWTITVYALGYNDYTVKFKV- : UniRef90_C7G565
UniRef90_R6V2K1 : ----------VAEGIEPEVKAANGSYGEFLRVD----LNGNYGGLGSGMYATRWTYYGNDSTYTTALASYGTKFAADNWMQLGLTDSLRCQLPAGTD-----GTGYWELTVYSMGYEDYTYKFQ-- : UniRef90_R6V2K1
UniRef90_R5N214 : ----------TATNVTPTVKDASGSYGEFLRVD---ITGDGYGDLGANMQAVRWDYCGDDATGTKVLRSFGTKFAADNWMQLGLTDSLRCQLPEGTD-----GTGYWRLTVYALGYADYSFVVQ-- : UniRef90_R5N214
UniRef90_A8SHX6 : ---------AEGLTVNLRSGSDVGSFGEFIRVD----LNGNYGELGSRMQSVVWTYYGNDSTYTHAKASYGTKFAADNWMQLGLSDSARCQLPEGTD-----GTGYWTITIRALGYADTVVKFQ-- : UniRef90_A8SHX6
UniRef90_D4J7K9 : --------------QALKTAPSADVGLTVQEGEGKYGEFGDYGDLAANMQAVKWTYYGSDSTYKNALATYGTKFAADNWMQLGLTDSLRCTLPAGTD-----GTGYWTITVTALGYEDVTYQFQ-- : UniRef90_D4J7K9
UniRef90_R7NKY5 : ---------AENVNIEVKDGDDVGSYGEYIRVD---FKGDGYGALGSKMYAVRWDYYGDDNSYNNKLVSFGTKFASDNWMQLGLTDSYRFKLPENTD-----GTGYWKLTIYALGYEDYTVNFQI- : UniRef90_R7NKY5
UniRef90_R6L581 : --------------ITTTVKEASGNYGEFLRVD---LTGDGYGDLGAAMQAVKWTYYGNDSTCTNALQTYGTKFAADNWMQLGLTKSLRCQLPEGYD-----GTGYWTLTVYALGYEDFTVQFQ-- : UniRef90_R6L581
UniRef90_R7C1J7 : --------------------PGAGSYGEFLRVD---LNGDAYGDLGSNMQAVTWTYYGYDDTYSKPLATYGTKFAADNWMQLGLTESIRCQLPEDYD-----GTGYWKLTISALGYEDFSFNIQ-- : UniRef90_R7C1J7
UniRef90_R6K306 : ---------AADITVNLRSTDTTGSYGEFLRVDLT----GNYGDLGANLQAVKWTYYGQDSTRTNALATFGTKFAADNWMQLGLTDSYRCQLPEGTD-----GTGYWTVTVYALGYEDYSFDIQ-- : UniRef90_R6K306
UniRef90_R7I128 : -----------ATGTDSGIADQAQKEVSVQEANGSYGEFNAYGELGANMQAVRWDYYGTDAEKDQPIVSFGTKFAADNWMQLGLTNSLRCQLPEGTD-----GTGIWKITVYALGFKDFTTTINV- : UniRef90_R7I128
UniRef90_R6M590 : ---------------------ANGSYGEFLRADNADASKGEYGALGAKMQAVKWTYYGNDSERKTALANFGTKFAADNWMQLGLTDSYRAALPGGTD-----GTGYWSLTVYALGYEDETVNFEV- : UniRef90_R6M590
UniRef90_R7C694 : -----------------------GSYGEFLRVDGAAANEG-YGPLGSRMQAVKWTYYGTDSTRTKAIASYGTKFAADNWMQLGLTESYRSELPSGTD-----GTGYWNVTIYGLGYEDASYDVEV- : UniRef90_R7C694
UniRef90_R7ISI0 : ---------------------DSSSYGDFIRVDLT----GNYGDLGANMQSVIWKYYGENDTTGTPLAVYGTKFAADNWMQLGLTESKRCTLPEGYD-----GSGNWTVTICALGYADTVIPVNV- : UniRef90_R7ISI0
UniRef90_U2KAE3 : ETPDGKVVDKDAVEI-SEVQHDSG-YGDFIRVD----INGDYGDLGAHMYAVRWDYYGDGDT---VLATYGTKFAADNWMQLGLTKSDRCQLPEGTD-----GYGRWDVTVYATGYQDFTFTV--- : UniRef90_U2KAE3
UniRef90_R5UYY2 : -------------------------YGDFLRVD----IGGDYGDLGAHMYAVRWDYYGDQDT---VLASYGTKFAADNWMQLGLTKSLRCQLPTGYE----SGAGKWNVTVYATGYQDYTFTIE-- : UniRef90_R5UYY2
UniRef90_R5U519 : ---------------------DSSKFGDFLRVD----LKKNYGDLGSAMQSVEWTYYGSGDT---ALATYGTKFAADNWMQLGLTDSLRCQLPQGTD-----GTGKWVLTIHALGYTDTKVEVNV- : UniRef90_R5U519
UniRef90_R6QBP8 : ---------------------------------------GEFKDYIYNVQGAKIEYLGEDGTATPVVA--GAKFASDLWISPNHGPVVEVAVTNSYDRFKDFGNGKYRITLMADGYKDVVLE---- : UniRef90_R6QBP8

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121--- :
OrigSeq         : ESPHDLVVDTVGTGYHSRFGSDAEASVMLKRADGSELSHREFIDYVMNFNTVRYDYYGDDASYTNLMASYGTKHSADSWWKTGRVPRISCGINYGFDRFKGSGPGYYRLTLIANGYRDVVADVRFL : OrigSeq

Jnet            : -----EEEEE----------------EEEEE----------HHHHHHHHEEEEEEEE---------HHH----HHH----------EEEEEE-------------EEEEEEEE-----EEEEEEE- : Jnet
jhmm            : -----EEEE-----------------EEEEE----------HHHHHHHHH-EEEEEE--------HHHH----HHHH---------EEEEEE-------------EEEEEEEE-----EEEEEEE- : jhmm
jpssm           : -----EEEEEEE-------------EEEEEEE----------HHHHHHEEEEEEEEE---------EH------------------EEEEEE-------------EEEEEEEE-----EEEEEEE- : jpssm

Lupas 14        : ------------------------------------------------------------------------------------------------------------------------------ : Lupas 14
Lupas 21        : ------------------------------------------------------------------------------------------------------------------------------ : Lupas 21
Lupas 28        : ------------------------------------------------------------------------------------------------------------------------------ : Lupas 28

Jnet_25         : -----BBB-BB-BB--------B--BB-B--B-B--B----BB-BBB-B-BB-B-BBB-------BBBBBBBBBBBB-BB---B---B-B-B---BB-----B-BBBBBBBBBBBB--BBB-B--- : Jnet_25
Jnet_5          : ------B---------------------B---------------BB--B--B-B--------------------BB-------------B----------------B-BBB-B---------B--- : Jnet_5
Jnet_0          : ---------------------------------------------------B--------------------------------------------------------B-B-B------------- : Jnet_0
Jnet Rel        : 999735787113567776777777408888615777777761044441200789985377877650201134112105655677745888743677766677774588999864886079998728 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.