SILENT_MODE
BLOCK_FILE jp_M0izc85.concise.blc
MAX_NSEQ 50
MAX_INPUT_LEN 50
OUTPUT_FILE jp_M0izc85.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 191 36   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 37 191 46 H SPACE
SUB_CHARS 1 37 191 46 E SPACE
SUB_CHARS 1 37 191 46 - SPACE
STRAND 3 40 8
COLOUR_TEXT_REGION 3 40 8 40 51
STRAND 37 40 39
COLOUR_TEXT_REGION 37 40 39 40 51
STRAND 52 40 60
COLOUR_TEXT_REGION 52 40 60 40 51
STRAND 78 40 81
COLOUR_TEXT_REGION 78 40 81 40 51
STRAND 87 40 90
COLOUR_TEXT_REGION 87 40 90 40 51
STRAND 104 40 109
COLOUR_TEXT_REGION 104 40 109 40 51
STRAND 113 40 116
COLOUR_TEXT_REGION 113 40 116 40 51
STRAND 122 40 125
COLOUR_TEXT_REGION 122 40 125 40 51
STRAND 130 40 138
COLOUR_TEXT_REGION 130 40 138 40 51
STRAND 142 40 146
COLOUR_TEXT_REGION 142 40 146 40 51
STRAND 161 40 163
COLOUR_TEXT_REGION 161 40 163 40 51
STRAND 175 40 179
COLOUR_TEXT_REGION 175 40 179 40 51
HELIX 12 40 18
COLOUR_TEXT_REGION 12 40 18 40 50
HELIX 35 40 36
COLOUR_TEXT_REGION 35 40 36 40 50
HELIX 40 40 40
COLOUR_TEXT_REGION 40 40 40 40 50
HELIX 150 40 158
COLOUR_TEXT_REGION 150 40 158 40 50
HELIX 185 40 186
COLOUR_TEXT_REGION 185 40 186 40 50
STRAND 3 45 8
COLOUR_TEXT_REGION 3 45 8 45 51
STRAND 36 45 39
COLOUR_TEXT_REGION 36 45 39 45 51
STRAND 52 45 60
COLOUR_TEXT_REGION 52 45 60 45 51
STRAND 78 45 81
COLOUR_TEXT_REGION 78 45 81 45 51
STRAND 87 45 91
COLOUR_TEXT_REGION 87 45 91 45 51
STRAND 105 45 110
COLOUR_TEXT_REGION 105 45 110 45 51
STRAND 114 45 115
COLOUR_TEXT_REGION 114 45 115 45 51
STRAND 122 45 125
COLOUR_TEXT_REGION 122 45 125 45 51
STRAND 130 45 139
COLOUR_TEXT_REGION 130 45 139 45 51
STRAND 142 45 145
COLOUR_TEXT_REGION 142 45 145 45 51
STRAND 160 45 163
COLOUR_TEXT_REGION 160 45 163 45 51
STRAND 175 45 178
COLOUR_TEXT_REGION 175 45 178 45 51
HELIX 11 45 18
COLOUR_TEXT_REGION 11 45 18 45 50
HELIX 23 45 24
COLOUR_TEXT_REGION 23 45 24 45 50
HELIX 40 45 42
COLOUR_TEXT_REGION 40 45 42 45 50
HELIX 149 45 158
COLOUR_TEXT_REGION 149 45 158 45 50
HELIX 174 45 174
COLOUR_TEXT_REGION 174 45 174 45 50
HELIX 183 45 187
COLOUR_TEXT_REGION 183 45 187 45 50
STRAND 3 46 8
COLOUR_TEXT_REGION 3 46 8 46 51
STRAND 52 46 60
COLOUR_TEXT_REGION 52 46 60 46 51
STRAND 79 46 81
COLOUR_TEXT_REGION 79 46 81 46 51
STRAND 87 46 89
COLOUR_TEXT_REGION 87 46 89 46 51
STRAND 104 46 109
COLOUR_TEXT_REGION 104 46 109 46 51
STRAND 113 46 116
COLOUR_TEXT_REGION 113 46 116 46 51
STRAND 121 46 125
COLOUR_TEXT_REGION 121 46 125 46 51
STRAND 130 46 138
COLOUR_TEXT_REGION 130 46 138 46 51
STRAND 142 46 147
COLOUR_TEXT_REGION 142 46 147 46 51
STRAND 162 46 163
COLOUR_TEXT_REGION 162 46 163 46 51
STRAND 175 46 179
COLOUR_TEXT_REGION 175 46 179 46 51
HELIX 35 46 39
COLOUR_TEXT_REGION 35 46 39 46 50
HELIX 151 46 158
COLOUR_TEXT_REGION 151 46 158 46 50