QUERY : ETSYGYATLSYADYWAGELGQSRDVLLADLDAGMFDAVSRATHGHGAFRQQFQYAVEVLGEKVLSKQETEDSRGRKKWEYETDPSVTKMVRASASFQDLGEDGEIKFEAVEGAVALADRASSFMVDSEEYKITNVKVHGMKFVPVAVPHELKGIAKEKFHFVEDSRVTENTNGLKTMLTEDSFSARKVSSM : QUERY
UniRef90_A6BJ85 : EYKYVYAGLSWAEYWAAEGVQAAGDTKGESDKGAFDVVTRPTVNHGLHRGSYQCAATIEAENGKSYEVS----------YWTDSKKA--------------------VLTDGKTITFDRGAITEEDGTTTKMTKYDVTGLKYVPVKVAAEDYEAFCKAYKVVENAKVTANTNGLKTATKNASFSAKETGT- : UniRef90_A6BJ85
UniRef90_R6M590 : DYTYLYAGLTWDQYWAAENSNTEADARGEMDKGAFDAVSRATTNHGLHRGSYQCDAVIYGEDGSEFDVS----------------------------HWSADGKTLY-LTDGTDVAYAKGTITKADGTQTKLKEYKVTGLKYVPVAVKTSELDDFKKTYKVVENANVTADTNGLKTATEEKDFSARKTGT- : UniRef90_R6M590
UniRef90_A8SHX6 : -YTYLYAALTWDEYWANEASSAQLDSHEEQDLGAFDAVSRATVNHGLHRGSFQSTAVIYAKDGSTY----------------------------TVSHWSDDGKTIY-LADGTTVGWNRGTITKADGSTVQMDHYEVLGTKYVPVRVATSDLADFCSKYTVVENAAVDKNTNGLKYATKNGTFSAAHNGT- : UniRef90_A8SHX6
UniRef90_R6V2K1 : -YKYVYAGLSWAEYWASELASSSDVADGELDKGAFDTVSRATTNHGLHRGSYQCTAVI---------------------YDTDGKEYPVSYWNSSSEAVLTDGSV-ITFNKGTITYNENGTE-----KTATMKDYEVKGIKYVPVKVKTADYDEFCKKYQVVENAEVTEKTNGLKEATKNESFGARATGS- : UniRef90_R6V2K1
UniRef90_R7EAA9 : EYKYVYAAMTWAEYWAAEGVQAAGDTRNEADKGAFDAVTRATANHGLHRGSFQCVAVIEAENGKTYEVS----------------------------HWSADGK-EITLTNGNVIKFNRGEITDTDGTITKLKDYEVTGLKYVPVKVASADYEAFCQKYNVVENANVTEATNGLKTVTKDESFSARQAGS- : UniRef90_R7EAA9
UniRef90_D4J7K9 : -YTYVYAGLSWAEYWAAEGVQAAGDLRDEYDKGAFDTVTRATANHGLHRGSFQCTDVIEAENGKEYKIS---------YWKSEGKTTKAV------------------LTDGSEITFNRGTITEADGTTTKLTKHHVTGLKYVPVKVAKDDYEAFKAKYDVVENAEVTAATNGLKTATKNSSFSAKAAGT- : UniRef90_D4J7K9
UniRef90_R6BNT1 : DYKYVYASLDWAEYWQNENVSEEADARGEYDKGAFDVVTRATKNHGLHRGSFQCDAVIRDTDGKAYEISYWTSEEVSAKDENGQDTTK----KVVYAVLTDGSKIQF--DKGTITYTENGET-----KTATMEDYEVKGIKYVPVAVKTEDYADFCKKYSVTEDAEVTADTNGLKVATKNASFAARKTGS- : UniRef90_R6BNT1
UniRef90_D4MVX7 : EYVYCYAGLTWNEYWASENDSSSDTLDSELDNGGYDAVTRATTNHGLHRGSFQCITTIYTTDGIAYQISNWE------------------------QVKGSDGKVTATYVEGRVT-FNKGTLTFADNSTKKMDHYSVSGIKYVPVKVKASDYNDFKAKYSVVENANVTASTNGLKEAVKGSSFKARTTGT- : UniRef90_D4MVX7
UniRef90_R6L581 : EYKYVYAGLTWAQYWAAETASADKDTRGEADLGAFDTVTRATTNHGLHRGSFQTTAIIKGEKG----------------------SYAVSYWE---------GQSTVVFTDGTKATYSRGTLTFEDGTTDEMLDYEVSGLKYVPVKVKTSDYEDFKKAYTVVENADVTANTNGLKTATKNESFSARANGT- : UniRef90_R6L581
UniRef90_R5ZZ89 : EYSYVYAGLTWQEYWANETTSNEKDTHGEYDKGAFDTVTRATTNHGLHRGSYQCMATIDTEDGKKYELAG----------------------------WSSDGK-QMILTDGTQLSYSKGTITNADGTTSKLSSYEVTGIKYVPVKVKTSDLADFEQHYRVVKNADVNADTNGLKTAVKNASFSARQTGS- : UniRef90_R5ZZ89
UniRef90_R6K306 : DYTYVYAGLSWEEYWNAENTQSSDVKDGEYDKGGFDTVSRATYNHGLHRGSFQCEAVIF---------------------DTEGKTYDVAYWT------SEDKAVKLVLTDGSKCTYNAKTLTFADGTTVTLDHYEVKGLKYVPVKVKTSDYEDFKSKYNVVENAEVTADTNGLKEAVKEASFGARINGT- : UniRef90_R6K306
UniRef90_R7C1J7 : EWTYCYVGLTWAEYWAHENASSSDVLDSESDKGGYDVITRATAKHGLHRGSYQCMATI---------FTTDADGKTGPEYKV--------------SHWSDDGKTIY-LTDGSSVSWNKGKITD-NGNTYTMSHYEVSGIKYVPVAVKTSQLNDLKAKYQVVENANVTANTNGLKTATENSSFSARKTGS- : UniRef90_R7C1J7
UniRef90_R7ISI0 : EYTYVYAELTYDEYYAAEPVQNGDSTRGEYDKGAFDAVTRATTNHGLHRGSFQSAVVI---------------------YDTEGNVYEAAGW---------DGKNTIILTDGTTVGFDRGTIT-IGEETKTMAGYEVTGFKYIPVAVKTSDYEEFKNQYKVVENAEVTADTNGLKEAVKNSSFGERQTGT- : UniRef90_R7ISI0
UniRef90_R6P754 : EYTYAYVGLSWAEYWAAENTSSSDAKDGEYDKGAFDTVTRATVNHGLHRGSFQCNAVIKAENGKEYAV----------EYWTDG--------------------TTAVLTDGSKITFNRGEITEESSATTKMTEYDVLGLKYVPVKVKTSDLDALKASYRVIENANVTENTNGLKTATKNESFSARVN--- : UniRef90_R6P754
UniRef90_R7C694 : -YTYLYADLNWAEYWAAEDVNETEDARGELDKGAFDAVSRATTNHGLHRGSFQCDAVITADNGQNYPVS-------YWEQDKDKNQS-------------------FYTTDGQKIGYAKGVMTLPDASTTKVVNYTVTGIKYVPVAVKTADLQDFKSKYKVVENASVTENTNGLKIAAKQATFGKRKTGT- : UniRef90_R7C694
UniRef90_R7D4S8 : -YSYVYAGLTWGEYWSQENGSDEKDSHNESDTGAFDAVTRATTNHGLHRGSYQCMATI---------------------YTTEGNAYQLSYWKSSTEPVLADGTVAIWTPADRKTGAP-ASIQVNGGAKESLDHYAVTGIKYVPVQVKAGDYADFAAKYPVVKNANVTVNTNGLKSATENESFSARKTGT- : UniRef90_R7D4S8
UniRef90_R7NKY5 : DYTYVFAGLTWDEYWKSEWTASSDVLDSEYDKGAFDVVSRATTNHGLHRGSFQCSTDIVATDA-----------------DGNEKIFTISYWTK------EDNKTVLVLKDGSKITDYAKGKFTYNNVAYTMAHYYVKGMKYIPVAVKNDDLADFESKYTVVKSANLDENTNGLKYAEKNTSFSQRNVGT- : UniRef90_R7NKY5
UniRef90_R7I128 : EYEYVYAGISWAQYWESEASSSAVDTRGESDKGAFDAVSRATTNHGIHRGSFQCNTTIYGE---------------------DGKTFDVSTWKSASELVLTDG-STVGFNKGTITYTENGQE-----KTTTMKNYNVTGIKYVPVAVKKSDYEAFAAQYPVVSNAAVTANTNGLKVAEKQADFGKRATGT- : UniRef90_R7I128
UniRef90_R7GV25 : EYQYVYAGLTWGEYWAAEDTSSSEDSHSEFDTGAFDTVTRATANHGLHRGSYQTEATIIAE---------------------DGTRFDVSYW--------EDKGSTLYLTDGSKVKWNRGSITTEDGKTYTMDHYEIYGLKYVPVAVKTADFADFCKKYNVVQDADVNAQTNGLKYVEKNGTFTARKS--- : UniRef90_R7GV25
UniRef90_UPI0003134C17 : -YKYVYAGLTWEQYWASENTSSNATADGETDKGGFDTVTRATVNHGLHRGSYQCEAVM---------------------YDKNGGSYEISYWTSANDAVLTDGTTV------KLNQPERGQITKADGSVVEFDHYTIVGLKYVPVAVKAADYEAFKSQFKVVEDADVTAETNGLKEAVKGSTFKARANGT- : UniRef90_UPI0003134C17
UniRef90_R5N214 : EYQYVYAGLTWAEYWASEVYAAGDTTSSELDKGAFDTVTRATTNHGLHRGSFQTETTIVAEDGSRYPIATWVD------------------------------RNTIKLTDGKTVGFKKGTITKADGTTVDMDHYEVYGLKYVPVAVRTEDYAAFCQKYNVVTNDGVLEDTNGLKYAVKNGTFEARKTG-- : UniRef90_R5N214
UniRef90_R7JW13 : -YKYVYAGLTWAEYWAAEGVQASDETDSESDKGAFDVVTRATTNHGLHRGSFQCAATI---------------------YMKDGTTYDVAYYTAATTAVLTNGE-------------------TVTYDKSQIDHYEVKGLKYVPVKVSEDDYEDFCKKYVVVENADVTENTNGLKIAVKNASFSARTTGS- : UniRef90_R7JW13
UniRef90_R5U519 : EYTYVYASVPYAEYYANEDVQSSDVMDGEYDKGAFDTVTRATANHGLHRGSFQQDVVI---------------------YDTDGNTYEPISWTDGNTAILSNGKTLVKASDRATGI----TTLTVDGKTSTYDHYVIKGIKYVPVKVKSKNLEAFKAAYSVTENADVNKNTNGLKKVSLNASFSAAQTGT- : UniRef90_R5U519
UniRef90_R6LRK9 : EYSYVYVGMSWSEYWAKETGSSSDVSRNEYDKGAFDAVTRATANHGLHRGSFQCSAVIEDTNGNKYELA----------YWNADGKAVMSDGSVYTRSTNEDKKAVF---------------TAEDGSSFIQADYKVTGIKYVPVKVKTADLNALQEEYAVVENADVTPNTNGLKTAEKQDTFSERTTGS- : UniRef90_R6LRK9
UniRef90_R5Z7T8 : EWTYCYVGLTWAEYWANEDTSSSDVEDSHYDKGGYDVVTRATTNHGLHRGSFQGNAVIKA------------------------KASDDTTKEFSVSHWSKDGKKFYQSTDATGVSYAKGTITDTDGTQYKLTSYEVKGTKYVPVKVKTTDLDALKANHTVVENANVTANTYGLKTATKQEDFSARSN--- : UniRef90_R5Z7T8
UniRef90_G1WM41 : DYTYVYAGLSWSEYWASEGVLAAGSTRGEADKGAFDVVTRATTNHGLHRGSFQCTAVIET---------------------KDGTTYNLAYWKDKDTFVTTDGQEVAFA-----------------NVKANIKDYKVTGLKYVPVKVKTSDYEAFKEKYTIVEKADVTENTNGLKTATKNASFSERANGT- : UniRef90_G1WM41
UniRef90_D4LQB5 : EYKYVYAGLTWDQFWASENTSASEDKRGESDMGGFDAVTRATANHGLHRGSFQTMATV---------------------YDVNGKSYELAGWKDKTTMILTDG-NTVSCSKGKINGAD-------------VAEYTVTGLKYIPVKVKTADYDAFKKAFKVVENAEVNANTNGLKTATKTATFSARANGT- : UniRef90_D4LQB5
UniRef90_R7FCJ1 : DYVYCYAALTWAEYWQNEASSTEKDTHGEYDLGAYDAVTRATSNHGLHRGSYQCTVKVYDTEGNAYDYT---------------------------------GKGQDESVDVVKNGNGGADITVNGEVAGTYDHSVNVGPKYVPVAVPADEYEAFKEAYTVYENGDVDANTPGLKTAEKDADFSKRSTS-- : UniRef90_R7FCJ1
UniRef90_U2KAE3 : DYVYCAASLTWAEYWENEASSADADSHGETDLGAYDAVTRATSNHGLHRGSYQCTVKVFDTEGNSYDYT---------------------------------GRGQNESVDVVSNRDAGTTTVMVDGKAAAYDHSVIVGPKYVPVAVPAADYEDFKKAYTVYENGQVDANTSGIKVAEKQEDFSKRSTS-- : UniRef90_U2KAE3
UniRef90_R5UYY2 : DYVYCAAALSWAEYWEQEAESADSDTRGESDLGAYDTVTRATSNHGLHRGSYQCTVKVYDTDGNAYDYTGKGNGESV-----------------------------------DVVKGDNGTMITVDGKEVTYDHSMILGPKYVPVAVPASLYDDFKQKYSVLENGDVSANTDGLKTVSQNETFSKRA---- : UniRef90_R5UYY2
UniRef90_R6AYB7 : --------------------------SAELDMGAFDTVSRATTNHGLHRGSYQCTSEI---------------------TKKDGTKLKVTYYTGAATGVLTNGEAFSY-------------------DKNEIESYVVTGLKYVPVKVKTEDYEAFKAAYTVVENAEVTENTNGLKTVTQNESFAARVN--- : UniRef90_R6AYB7
UniRef90_R6QBP8 : -YKFARKTLTYGEYWYAEATQSANDTGADTDAGMYDAVSRATTGYGLGRLSFTQAVNALNSNGEMAPFSSSIKYENGAYTVVRPDNAKADFGYDGSSNRGSNGKITATGIKDVVV---------------------------------------------------------------------------- : UniRef90_R6QBP8
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181------- :
OrigSeq : ETSYGYATLSYADYWAGELGQSRDVLLADLDAGMFDAVSRATHGHGAFRQQFQYAVEVLGEKVLSKQETEDSRGRKKWEYETDPSVTKMVRASASFQDLGEDGEIKFEAVEGAVALADRASSFMVDSEEYKITNVKVHGMKFVPVAVPHELKGIAKEKFHFVEDSRVTENTNGLKTMLTEDSFSARKVSSM : OrigSeq
Jnet : --EEEEEE---HHHHHHH----------------HHEEEH-----------EEEEEEEEE-----------------EEEE-----EEEE-------------EEEEEE---EEEE-----EEEE----EEEEEEEEE---EEEEE---HHHHHHHHH--EEE-----------EEEEE-----HH----- : Jnet
jhmm : --EEEEEE--HHHHHHHH----HH-----------EEEEHHH---------EEEEEEEEE-----------------EEEE-----EEEEE-------------EEEEEE---EE------EEEE----EEEEEEEEEE--EEEE---HHHHHHHHHH-EEEE----------HEEEE----HHHHH---- : jhmm
jpssm : --EEEEEE--------------------------HHHHH------------EEEEEEEEE------------------EEE-----EEE--------------EEEEEE---EEEE----EEEEE----EEEEEEEEE---EEEEEE---HHHHHHHH---EE-----------EEEEE------------ : jpssm
Lupas 14 : ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : -B-BBBBBBBBB-BBB-------------BB-BBBBBBBBBB--BBBBBBBBBBBB-BB---B--B-BB--------B-B------B-BB-B------B-----BBB-B-----B-------B--------B--B-B--B-BBBB-B----B--B---B-BB--B-B---B-BB--B-----B-------- : Jnet_25
Jnet_5 : ----B---B------------------------B---BB-B--------------B-B------------------------------------------------------------------------------------B-B-B-------B------------------B----------------- : Jnet_5
Jnet_0 : ----B--------------------------------B--------------------------------------------------------------------------------------------------------B-----------B------------------------------------ : Jnet_0
Jnet Rel : 94689984471023332057773253344456540111002377776675116777886157777667776777776003046775143306776667777741899841842892378607871576235213788607168982321117878863413123677777777247872367211116899 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.