SILENT_MODE BLOCK_FILE jp_BFjBJke.concise.blc MAX_NSEQ 1067 MAX_INPUT_LEN 1069 OUTPUT_FILE jp_BFjBJke.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 312 1056 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1057 312 1066 H SPACE SUB_CHARS 1 1057 312 1066 E SPACE SUB_CHARS 1 1057 312 1066 - SPACE STRAND 12 1060 17 COLOUR_TEXT_REGION 12 1060 17 1060 51 STRAND 22 1060 28 COLOUR_TEXT_REGION 22 1060 28 1060 51 STRAND 34 1060 39 COLOUR_TEXT_REGION 34 1060 39 1060 51 STRAND 45 1060 46 COLOUR_TEXT_REGION 45 1060 46 1060 51 STRAND 64 1060 68 COLOUR_TEXT_REGION 64 1060 68 1060 51 STRAND 75 1060 81 COLOUR_TEXT_REGION 75 1060 81 1060 51 STRAND 86 1060 92 COLOUR_TEXT_REGION 86 1060 92 1060 51 STRAND 115 1060 120 COLOUR_TEXT_REGION 115 1060 120 1060 51 STRAND 129 1060 136 COLOUR_TEXT_REGION 129 1060 136 1060 51 STRAND 141 1060 146 COLOUR_TEXT_REGION 141 1060 146 1060 51 STRAND 169 1060 173 COLOUR_TEXT_REGION 169 1060 173 1060 51 STRAND 177 1060 184 COLOUR_TEXT_REGION 177 1060 184 1060 51 STRAND 189 1060 194 COLOUR_TEXT_REGION 189 1060 194 1060 51 STRAND 216 1060 218 COLOUR_TEXT_REGION 216 1060 218 1060 51 STRAND 224 1060 231 COLOUR_TEXT_REGION 224 1060 231 1060 51 STRAND 236 1060 241 COLOUR_TEXT_REGION 236 1060 241 1060 51 STRAND 266 1060 270 COLOUR_TEXT_REGION 266 1060 270 1060 51 STRAND 275 1060 281 COLOUR_TEXT_REGION 275 1060 281 1060 51 STRAND 286 1060 292 COLOUR_TEXT_REGION 286 1060 292 1060 51 STRAND 13 1065 17 COLOUR_TEXT_REGION 13 1065 17 1065 51 STRAND 22 1065 28 COLOUR_TEXT_REGION 22 1065 28 1065 51 STRAND 34 1065 39 COLOUR_TEXT_REGION 34 1065 39 1065 51 STRAND 64 1065 68 COLOUR_TEXT_REGION 64 1065 68 1065 51 STRAND 75 1065 81 COLOUR_TEXT_REGION 75 1065 81 1065 51 STRAND 86 1065 92 COLOUR_TEXT_REGION 86 1065 92 1065 51 STRAND 116 1065 119 COLOUR_TEXT_REGION 116 1065 119 1065 51 STRAND 129 1065 136 COLOUR_TEXT_REGION 129 1065 136 1065 51 STRAND 141 1065 146 COLOUR_TEXT_REGION 141 1065 146 1065 51 STRAND 169 1065 172 COLOUR_TEXT_REGION 169 1065 172 1065 51 STRAND 178 1065 184 COLOUR_TEXT_REGION 178 1065 184 1065 51 STRAND 189 1065 194 COLOUR_TEXT_REGION 189 1065 194 1065 51 STRAND 215 1065 219 COLOUR_TEXT_REGION 215 1065 219 1065 51 STRAND 224 1065 231 COLOUR_TEXT_REGION 224 1065 231 1065 51 STRAND 236 1065 241 COLOUR_TEXT_REGION 236 1065 241 1065 51 STRAND 266 1065 269 COLOUR_TEXT_REGION 266 1065 269 1065 51 STRAND 275 1065 281 COLOUR_TEXT_REGION 275 1065 281 1065 51 STRAND 286 1065 292 COLOUR_TEXT_REGION 286 1065 292 1065 51 STRAND 11 1066 17 COLOUR_TEXT_REGION 11 1066 17 1066 51 STRAND 22 1066 29 COLOUR_TEXT_REGION 22 1066 29 1066 51 STRAND 34 1066 39 COLOUR_TEXT_REGION 34 1066 39 1066 51 STRAND 44 1066 46 COLOUR_TEXT_REGION 44 1066 46 1066 51 STRAND 63 1066 68 COLOUR_TEXT_REGION 63 1066 68 1066 51 STRAND 75 1066 81 COLOUR_TEXT_REGION 75 1066 81 1066 51 STRAND 86 1066 92 COLOUR_TEXT_REGION 86 1066 92 1066 51 STRAND 108 1066 108 COLOUR_TEXT_REGION 108 1066 108 1066 51 STRAND 115 1066 120 COLOUR_TEXT_REGION 115 1066 120 1066 51 STRAND 129 1066 135 COLOUR_TEXT_REGION 129 1066 135 1066 51 STRAND 141 1066 147 COLOUR_TEXT_REGION 141 1066 147 1066 51 STRAND 169 1066 173 COLOUR_TEXT_REGION 169 1066 173 1066 51 STRAND 177 1066 184 COLOUR_TEXT_REGION 177 1066 184 1066 51 STRAND 189 1066 194 COLOUR_TEXT_REGION 189 1066 194 1066 51 STRAND 224 1066 231 COLOUR_TEXT_REGION 224 1066 231 1066 51 STRAND 236 1066 241 COLOUR_TEXT_REGION 236 1066 241 1066 51 STRAND 265 1066 270 COLOUR_TEXT_REGION 265 1066 270 1066 51 STRAND 275 1066 281 COLOUR_TEXT_REGION 275 1066 281 1066 51 STRAND 286 1066 292 COLOUR_TEXT_REGION 286 1066 292 1066 51 STRAND 299 1066 301 COLOUR_TEXT_REGION 299 1066 301 1066 51