SILENT_MODE BLOCK_FILE jp_BLCwTMl.concise.blc MAX_NSEQ 782 MAX_INPUT_LEN 784 OUTPUT_FILE jp_BLCwTMl.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 292 771 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 772 292 781 H SPACE SUB_CHARS 1 772 292 781 E SPACE SUB_CHARS 1 772 292 781 - SPACE HELIX 6 775 35 COLOUR_TEXT_REGION 6 775 35 775 50 HELIX 52 775 60 COLOUR_TEXT_REGION 52 775 60 775 50 HELIX 67 775 98 COLOUR_TEXT_REGION 67 775 98 775 50 HELIX 111 775 128 COLOUR_TEXT_REGION 111 775 128 775 50 HELIX 134 775 141 COLOUR_TEXT_REGION 134 775 141 775 50 HELIX 155 775 164 COLOUR_TEXT_REGION 155 775 164 775 50 HELIX 174 775 199 COLOUR_TEXT_REGION 174 775 199 775 50 HELIX 212 775 225 COLOUR_TEXT_REGION 212 775 225 775 50 HELIX 229 775 236 COLOUR_TEXT_REGION 229 775 236 775 50 HELIX 252 775 262 COLOUR_TEXT_REGION 252 775 262 775 50 HELIX 267 775 291 COLOUR_TEXT_REGION 267 775 291 775 50 HELIX 6 780 35 COLOUR_TEXT_REGION 6 780 35 780 50 HELIX 52 780 61 COLOUR_TEXT_REGION 52 780 61 780 50 HELIX 67 780 98 COLOUR_TEXT_REGION 67 780 98 780 50 HELIX 111 780 128 COLOUR_TEXT_REGION 111 780 128 780 50 HELIX 133 780 141 COLOUR_TEXT_REGION 133 780 141 780 50 HELIX 155 780 164 COLOUR_TEXT_REGION 155 780 164 780 50 HELIX 170 780 200 COLOUR_TEXT_REGION 170 780 200 780 50 HELIX 211 780 226 COLOUR_TEXT_REGION 211 780 226 780 50 HELIX 228 780 237 COLOUR_TEXT_REGION 228 780 237 780 50 HELIX 252 780 262 COLOUR_TEXT_REGION 252 780 262 780 50 HELIX 267 780 291 COLOUR_TEXT_REGION 267 780 291 780 50 STRAND 53 781 53 COLOUR_TEXT_REGION 53 781 53 781 51 STRAND 58 781 60 COLOUR_TEXT_REGION 58 781 60 781 51 STRAND 99 781 100 COLOUR_TEXT_REGION 99 781 100 781 51 STRAND 126 781 130 COLOUR_TEXT_REGION 126 781 130 781 51 STRAND 138 781 141 COLOUR_TEXT_REGION 138 781 141 781 51 STRAND 158 781 161 COLOUR_TEXT_REGION 158 781 161 781 51 STRAND 233 781 234 COLOUR_TEXT_REGION 233 781 234 781 51 HELIX 6 781 35 COLOUR_TEXT_REGION 6 781 35 781 50 HELIX 83 781 83 COLOUR_TEXT_REGION 83 781 83 781 50 HELIX 111 781 116 COLOUR_TEXT_REGION 111 781 116 781 50 HELIX 137 781 137 COLOUR_TEXT_REGION 137 781 137 781 50 HELIX 157 781 157 COLOUR_TEXT_REGION 157 781 157 781 50 HELIX 162 781 163 COLOUR_TEXT_REGION 162 781 163 781 50 HELIX 175 781 198 COLOUR_TEXT_REGION 175 781 198 781 50 HELIX 214 781 224 COLOUR_TEXT_REGION 214 781 224 781 50 HELIX 251 781 262 COLOUR_TEXT_REGION 251 781 262 781 50 HELIX 267 781 291 COLOUR_TEXT_REGION 267 781 291 781 50