SILENT_MODE BLOCK_FILE jp_mVnVXlQ.concise.blc MAX_NSEQ 615 MAX_INPUT_LEN 617 OUTPUT_FILE jp_mVnVXlQ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 115 604 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 605 115 614 H SPACE SUB_CHARS 1 605 115 614 E SPACE SUB_CHARS 1 605 115 614 - SPACE STRAND 5 608 10 COLOUR_TEXT_REGION 5 608 10 608 51 STRAND 15 608 22 COLOUR_TEXT_REGION 15 608 22 608 51 STRAND 28 608 35 COLOUR_TEXT_REGION 28 608 35 608 51 STRAND 40 608 47 COLOUR_TEXT_REGION 40 608 47 608 51 STRAND 55 608 61 COLOUR_TEXT_REGION 55 608 61 608 51 STRAND 69 608 77 COLOUR_TEXT_REGION 69 608 77 608 51 STRAND 82 608 88 COLOUR_TEXT_REGION 82 608 88 608 51 STRAND 93 608 95 COLOUR_TEXT_REGION 93 608 95 608 51 STRAND 98 608 106 COLOUR_TEXT_REGION 98 608 106 608 51 STRAND 5 613 10 COLOUR_TEXT_REGION 5 613 10 613 51 STRAND 15 613 22 COLOUR_TEXT_REGION 15 613 22 613 51 STRAND 28 613 35 COLOUR_TEXT_REGION 28 613 35 613 51 STRAND 40 613 48 COLOUR_TEXT_REGION 40 613 48 613 51 STRAND 55 613 60 COLOUR_TEXT_REGION 55 613 60 613 51 STRAND 69 613 77 COLOUR_TEXT_REGION 69 613 77 613 51 STRAND 82 613 88 COLOUR_TEXT_REGION 82 613 88 613 51 STRAND 93 613 95 COLOUR_TEXT_REGION 93 613 95 613 51 STRAND 98 613 106 COLOUR_TEXT_REGION 98 613 106 613 51 STRAND 6 614 10 COLOUR_TEXT_REGION 6 614 10 614 51 STRAND 15 614 22 COLOUR_TEXT_REGION 15 614 22 614 51 STRAND 28 614 35 COLOUR_TEXT_REGION 28 614 35 614 51 STRAND 40 614 46 COLOUR_TEXT_REGION 40 614 46 614 51 STRAND 57 614 57 COLOUR_TEXT_REGION 57 614 57 614 51 STRAND 60 614 64 COLOUR_TEXT_REGION 60 614 64 614 51 STRAND 70 614 77 COLOUR_TEXT_REGION 70 614 77 614 51 STRAND 82 614 87 COLOUR_TEXT_REGION 82 614 87 614 51 STRAND 93 614 94 COLOUR_TEXT_REGION 93 614 94 614 51 STRAND 98 614 106 COLOUR_TEXT_REGION 98 614 106 614 51