SILENT_MODE
BLOCK_FILE jp_KePDbm4.concise.blc
MAX_NSEQ 134
MAX_INPUT_LEN 136
OUTPUT_FILE jp_KePDbm4.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 167 123   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 124 167 133 H SPACE
SUB_CHARS 1 124 167 133 E SPACE
SUB_CHARS 1 124 167 133 - SPACE
STRAND 19 127 21
COLOUR_TEXT_REGION 19 127 21 127 51
STRAND 27 127 34
COLOUR_TEXT_REGION 27 127 34 127 51
STRAND 51 127 54
COLOUR_TEXT_REGION 51 127 54 127 51
STRAND 77 127 83
COLOUR_TEXT_REGION 77 127 83 127 51
STRAND 112 127 117
COLOUR_TEXT_REGION 112 127 117 127 51
STRAND 126 127 132
COLOUR_TEXT_REGION 126 127 132 127 51
STRAND 159 127 166
COLOUR_TEXT_REGION 159 127 166 127 51
HELIX 4 127 11
COLOUR_TEXT_REGION 4 127 11 127 50
HELIX 13 127 18
COLOUR_TEXT_REGION 13 127 18 127 50
HELIX 37 127 42
COLOUR_TEXT_REGION 37 127 42 127 50
HELIX 62 127 70
COLOUR_TEXT_REGION 62 127 70 127 50
HELIX 97 127 108
COLOUR_TEXT_REGION 97 127 108 127 50
HELIX 136 127 154
COLOUR_TEXT_REGION 136 127 154 127 50
STRAND 16 132 21
COLOUR_TEXT_REGION 16 132 21 132 51
STRAND 26 132 34
COLOUR_TEXT_REGION 26 132 34 132 51
STRAND 51 132 54
COLOUR_TEXT_REGION 51 132 54 132 51
STRAND 77 132 82
COLOUR_TEXT_REGION 77 132 82 132 51
STRAND 111 132 116
COLOUR_TEXT_REGION 111 132 116 132 51
STRAND 126 132 132
COLOUR_TEXT_REGION 126 132 132 132 51
STRAND 159 132 165
COLOUR_TEXT_REGION 159 132 165 132 51
HELIX 4 132 8
COLOUR_TEXT_REGION 4 132 8 132 50
HELIX 37 132 42
COLOUR_TEXT_REGION 37 132 42 132 50
HELIX 62 132 70
COLOUR_TEXT_REGION 62 132 70 132 50
HELIX 98 132 108
COLOUR_TEXT_REGION 98 132 108 132 50
HELIX 136 132 152
COLOUR_TEXT_REGION 136 132 152 132 50
STRAND 27 133 33
COLOUR_TEXT_REGION 27 133 33 133 51
STRAND 51 133 53
COLOUR_TEXT_REGION 51 133 53 133 51
STRAND 77 133 83
COLOUR_TEXT_REGION 77 133 83 133 51
STRAND 112 133 117
COLOUR_TEXT_REGION 112 133 117 133 51
STRAND 126 133 132
COLOUR_TEXT_REGION 126 133 132 133 51
STRAND 160 133 166
COLOUR_TEXT_REGION 160 133 166 133 51
HELIX 4 133 21
COLOUR_TEXT_REGION 4 133 21 133 50
HELIX 37 133 42
COLOUR_TEXT_REGION 37 133 42 133 50
HELIX 63 133 70
COLOUR_TEXT_REGION 63 133 70 133 50
HELIX 97 133 109
COLOUR_TEXT_REGION 97 133 109 133 50
HELIX 137 133 155
COLOUR_TEXT_REGION 137 133 155 133 50