SILENT_MODE BLOCK_FILE jp_AX0CXzI.concise.blc MAX_NSEQ 904 MAX_INPUT_LEN 906 OUTPUT_FILE jp_AX0CXzI.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 271 893 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 894 271 903 H SPACE SUB_CHARS 1 894 271 903 E SPACE SUB_CHARS 1 894 271 903 - SPACE STRAND 188 897 190 COLOUR_TEXT_REGION 188 897 190 897 51 HELIX 6 897 19 COLOUR_TEXT_REGION 6 897 19 897 50 HELIX 40 897 45 COLOUR_TEXT_REGION 40 897 45 897 50 HELIX 48 897 48 COLOUR_TEXT_REGION 48 897 48 897 50 HELIX 50 897 62 COLOUR_TEXT_REGION 50 897 62 897 50 HELIX 73 897 92 COLOUR_TEXT_REGION 73 897 92 897 50 HELIX 115 897 122 COLOUR_TEXT_REGION 115 897 122 897 50 HELIX 128 897 140 COLOUR_TEXT_REGION 128 897 140 897 50 HELIX 145 897 157 COLOUR_TEXT_REGION 145 897 157 897 50 HELIX 163 897 175 COLOUR_TEXT_REGION 163 897 175 897 50 HELIX 216 897 224 COLOUR_TEXT_REGION 216 897 224 897 50 HELIX 253 897 268 COLOUR_TEXT_REGION 253 897 268 897 50 STRAND 188 902 190 COLOUR_TEXT_REGION 188 902 190 902 51 HELIX 6 902 18 COLOUR_TEXT_REGION 6 902 18 902 50 HELIX 40 902 45 COLOUR_TEXT_REGION 40 902 45 902 50 HELIX 50 902 61 COLOUR_TEXT_REGION 50 902 61 902 50 HELIX 73 902 92 COLOUR_TEXT_REGION 73 902 92 902 50 HELIX 115 902 122 COLOUR_TEXT_REGION 115 902 122 902 50 HELIX 128 902 140 COLOUR_TEXT_REGION 128 902 140 902 50 HELIX 145 902 158 COLOUR_TEXT_REGION 145 902 158 902 50 HELIX 163 902 174 COLOUR_TEXT_REGION 163 902 174 902 50 HELIX 216 902 224 COLOUR_TEXT_REGION 216 902 224 902 50 HELIX 253 902 268 COLOUR_TEXT_REGION 253 902 268 902 50 STRAND 217 903 220 COLOUR_TEXT_REGION 217 903 220 903 51 HELIX 6 903 19 COLOUR_TEXT_REGION 6 903 19 903 50 HELIX 40 903 63 COLOUR_TEXT_REGION 40 903 63 903 50 HELIX 73 903 92 COLOUR_TEXT_REGION 73 903 92 903 50 HELIX 97 903 98 COLOUR_TEXT_REGION 97 903 98 903 50 HELIX 114 903 122 COLOUR_TEXT_REGION 114 903 122 903 50 HELIX 128 903 140 COLOUR_TEXT_REGION 128 903 140 903 50 HELIX 145 903 156 COLOUR_TEXT_REGION 145 903 156 903 50 HELIX 171 903 175 COLOUR_TEXT_REGION 171 903 175 903 50 HELIX 185 903 190 COLOUR_TEXT_REGION 185 903 190 903 50 HELIX 199 903 202 COLOUR_TEXT_REGION 199 903 202 903 50 HELIX 253 903 268 COLOUR_TEXT_REGION 253 903 268 903 50