SILENT_MODE BLOCK_FILE jp_I5vy5zU.concise.blc MAX_NSEQ 905 MAX_INPUT_LEN 907 OUTPUT_FILE jp_I5vy5zU.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 202 894 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 895 202 904 H SPACE SUB_CHARS 1 895 202 904 E SPACE SUB_CHARS 1 895 202 904 - SPACE STRAND 3 898 7 COLOUR_TEXT_REGION 3 898 7 898 51 STRAND 29 898 35 COLOUR_TEXT_REGION 29 898 35 898 51 STRAND 71 898 75 COLOUR_TEXT_REGION 71 898 75 898 51 STRAND 93 898 98 COLOUR_TEXT_REGION 93 898 98 898 51 STRAND 121 898 125 COLOUR_TEXT_REGION 121 898 125 898 51 STRAND 129 898 132 COLOUR_TEXT_REGION 129 898 132 898 51 HELIX 17 898 24 COLOUR_TEXT_REGION 17 898 24 898 50 HELIX 48 898 66 COLOUR_TEXT_REGION 48 898 66 898 50 HELIX 78 898 87 COLOUR_TEXT_REGION 78 898 87 898 50 HELIX 102 898 116 COLOUR_TEXT_REGION 102 898 116 898 50 HELIX 147 898 157 COLOUR_TEXT_REGION 147 898 157 898 50 STRAND 3 903 7 COLOUR_TEXT_REGION 3 903 7 903 51 STRAND 29 903 35 COLOUR_TEXT_REGION 29 903 35 903 51 STRAND 71 903 75 COLOUR_TEXT_REGION 71 903 75 903 51 STRAND 93 903 98 COLOUR_TEXT_REGION 93 903 98 903 51 STRAND 122 903 125 COLOUR_TEXT_REGION 122 903 125 903 51 STRAND 130 903 132 COLOUR_TEXT_REGION 130 903 132 903 51 HELIX 17 903 24 COLOUR_TEXT_REGION 17 903 24 903 50 HELIX 48 903 66 COLOUR_TEXT_REGION 48 903 66 903 50 HELIX 78 903 88 COLOUR_TEXT_REGION 78 903 88 903 50 HELIX 102 903 117 COLOUR_TEXT_REGION 102 903 117 903 50 HELIX 147 903 157 COLOUR_TEXT_REGION 147 903 157 903 50 STRAND 3 904 7 COLOUR_TEXT_REGION 3 904 7 904 51 STRAND 29 904 35 COLOUR_TEXT_REGION 29 904 35 904 51 STRAND 71 904 75 COLOUR_TEXT_REGION 71 904 75 904 51 STRAND 93 904 98 COLOUR_TEXT_REGION 93 904 98 904 51 STRAND 121 904 125 COLOUR_TEXT_REGION 121 904 125 904 51 STRAND 129 904 131 COLOUR_TEXT_REGION 129 904 131 904 51 HELIX 16 904 24 COLOUR_TEXT_REGION 16 904 24 904 50 HELIX 47 904 66 COLOUR_TEXT_REGION 47 904 66 904 50 HELIX 79 904 87 COLOUR_TEXT_REGION 79 904 87 904 50 HELIX 102 904 116 COLOUR_TEXT_REGION 102 904 116 904 50 HELIX 147 904 156 COLOUR_TEXT_REGION 147 904 156 904 50