SILENT_MODE BLOCK_FILE jp_kctcdGG.concise.blc MAX_NSEQ 801 MAX_INPUT_LEN 803 OUTPUT_FILE jp_kctcdGG.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 250 790 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 791 250 800 H SPACE SUB_CHARS 1 791 250 800 E SPACE SUB_CHARS 1 791 250 800 - SPACE STRAND 43 794 48 COLOUR_TEXT_REGION 43 794 48 794 51 STRAND 69 794 73 COLOUR_TEXT_REGION 69 794 73 794 51 STRAND 100 794 101 COLOUR_TEXT_REGION 100 794 101 794 51 STRAND 135 794 141 COLOUR_TEXT_REGION 135 794 141 794 51 STRAND 164 794 168 COLOUR_TEXT_REGION 164 794 168 794 51 STRAND 198 794 203 COLOUR_TEXT_REGION 198 794 203 794 51 HELIX 5 794 18 COLOUR_TEXT_REGION 5 794 18 794 50 HELIX 26 794 38 COLOUR_TEXT_REGION 26 794 38 794 50 HELIX 52 794 61 COLOUR_TEXT_REGION 52 794 61 794 50 HELIX 83 794 96 COLOUR_TEXT_REGION 83 794 96 794 50 HELIX 108 794 110 COLOUR_TEXT_REGION 108 794 110 794 50 HELIX 115 794 129 COLOUR_TEXT_REGION 115 794 129 794 50 HELIX 148 794 160 COLOUR_TEXT_REGION 148 794 160 794 50 HELIX 179 794 189 COLOUR_TEXT_REGION 179 794 189 794 50 HELIX 209 794 223 COLOUR_TEXT_REGION 209 794 223 794 50 HELIX 237 794 248 COLOUR_TEXT_REGION 237 794 248 794 50 STRAND 44 799 48 COLOUR_TEXT_REGION 44 799 48 799 51 STRAND 69 799 74 COLOUR_TEXT_REGION 69 799 74 799 51 STRAND 100 799 102 COLOUR_TEXT_REGION 100 799 102 799 51 STRAND 135 799 141 COLOUR_TEXT_REGION 135 799 141 799 51 STRAND 165 799 168 COLOUR_TEXT_REGION 165 799 168 799 51 STRAND 198 799 203 COLOUR_TEXT_REGION 198 799 203 799 51 HELIX 6 799 18 COLOUR_TEXT_REGION 6 799 18 799 50 HELIX 26 799 38 COLOUR_TEXT_REGION 26 799 38 799 50 HELIX 52 799 60 COLOUR_TEXT_REGION 52 799 60 799 50 HELIX 83 799 96 COLOUR_TEXT_REGION 83 799 96 799 50 HELIX 107 799 111 COLOUR_TEXT_REGION 107 799 111 799 50 HELIX 115 799 129 COLOUR_TEXT_REGION 115 799 129 799 50 HELIX 148 799 160 COLOUR_TEXT_REGION 148 799 160 799 50 HELIX 179 799 191 COLOUR_TEXT_REGION 179 799 191 799 50 HELIX 209 799 222 COLOUR_TEXT_REGION 209 799 222 799 50 HELIX 237 799 248 COLOUR_TEXT_REGION 237 799 248 799 50 STRAND 43 800 47 COLOUR_TEXT_REGION 43 800 47 800 51 STRAND 68 800 73 COLOUR_TEXT_REGION 68 800 73 800 51 STRAND 135 800 140 COLOUR_TEXT_REGION 135 800 140 800 51 STRAND 163 800 168 COLOUR_TEXT_REGION 163 800 168 800 51 STRAND 198 800 202 COLOUR_TEXT_REGION 198 800 202 800 51 STRAND 233 800 235 COLOUR_TEXT_REGION 233 800 235 800 51 HELIX 4 800 17 COLOUR_TEXT_REGION 4 800 17 800 50 HELIX 26 800 37 COLOUR_TEXT_REGION 26 800 37 800 50 HELIX 53 800 61 COLOUR_TEXT_REGION 53 800 61 800 50 HELIX 83 800 95 COLOUR_TEXT_REGION 83 800 95 800 50 HELIX 115 800 129 COLOUR_TEXT_REGION 115 800 129 800 50 HELIX 148 800 159 COLOUR_TEXT_REGION 148 800 159 800 50 HELIX 179 800 189 COLOUR_TEXT_REGION 179 800 189 800 50 HELIX 209 800 223 COLOUR_TEXT_REGION 209 800 223 800 50 HELIX 237 800 248 COLOUR_TEXT_REGION 237 800 248 800 50