SILENT_MODE
BLOCK_FILE jp_mnTJpX0.concise.blc
MAX_NSEQ 71
MAX_INPUT_LEN 73
OUTPUT_FILE jp_mnTJpX0.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 108 60   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 61 108 70 H SPACE
SUB_CHARS 1 61 108 70 E SPACE
SUB_CHARS 1 61 108 70 - SPACE
STRAND 11 64 17
COLOUR_TEXT_REGION 11 64 17 64 51
STRAND 22 64 32
COLOUR_TEXT_REGION 22 64 32 64 51
STRAND 37 64 45
COLOUR_TEXT_REGION 37 64 45 64 51
STRAND 51 64 59
COLOUR_TEXT_REGION 51 64 59 64 51
STRAND 63 64 68
COLOUR_TEXT_REGION 63 64 68 64 51
STRAND 73 64 80
COLOUR_TEXT_REGION 73 64 80 64 51
STRAND 85 64 91
COLOUR_TEXT_REGION 85 64 91 64 51
STRAND 101 64 106
COLOUR_TEXT_REGION 101 64 106 64 51
STRAND 11 69 17
COLOUR_TEXT_REGION 11 69 17 69 51
STRAND 22 69 32
COLOUR_TEXT_REGION 22 69 32 69 51
STRAND 37 69 45
COLOUR_TEXT_REGION 37 69 45 69 51
STRAND 50 69 59
COLOUR_TEXT_REGION 50 69 59 69 51
STRAND 63 69 67
COLOUR_TEXT_REGION 63 69 67 69 51
STRAND 73 69 80
COLOUR_TEXT_REGION 73 69 80 69 51
STRAND 85 69 91
COLOUR_TEXT_REGION 85 69 91 69 51
STRAND 97 69 98
COLOUR_TEXT_REGION 97 69 98 69 51
STRAND 101 69 106
COLOUR_TEXT_REGION 101 69 106 69 51
STRAND 11 70 17
COLOUR_TEXT_REGION 11 70 17 70 51
STRAND 23 70 31
COLOUR_TEXT_REGION 23 70 31 70 51
STRAND 37 70 45
COLOUR_TEXT_REGION 37 70 45 70 51
STRAND 52 70 60
COLOUR_TEXT_REGION 52 70 60 70 51
STRAND 63 70 69
COLOUR_TEXT_REGION 63 70 69 70 51
STRAND 74 70 80
COLOUR_TEXT_REGION 74 70 80 70 51
STRAND 85 70 92
COLOUR_TEXT_REGION 85 70 92 70 51
STRAND 101 70 105
COLOUR_TEXT_REGION 101 70 105 70 51