QUERY : PDAYADDASGAYVLAGRQPGRGDYTGRLVLKKAGEDYEVTMTLDFADGSRSFSGTGRILGAGEWRATLSDGTVTIRQIFALQDGRFSGRWHDADSDVIGGRLAAVKAD : QUERY
UniRef90_M4WZL4 : -RPQAESLAGEWSFAGHMPGKGDLAGTMSVAKSGDDFKVRVKGQYADGEPSGEGSAVLYNGYEWRGNVTVGDLSMRQVFAALDGQMQGRMFDKAHDERGLDFVAAK-- : UniRef90_M4WZL4
UniRef90_U8MYJ9 : -SPNAEALVGEWNFSGHLPGKGEVAGVMSVAADGSDFKVNVKGQYADGSPNGDGSAILYTGYEWRGKVKIDGVTMRQVFAAQGDSMQGRMFEAEHDERGLDFVAAK-- : UniRef90_U8MYJ9
UniRef90_G2J4L5 : -KPQPAALAGRWSFSGHMPGKGDVLGVMTVSPAGKDFKVAVQGRYADGSFNGNGSALLYNGYEWRASVKVAGVAMRQVLMAKDGEMQGRMFEEAHDERGLDFHAAK-- : UniRef90_G2J4L5
UniRef90_Q1I9C7 : -RPKAEALAGQWAFSGHMLAKGDVRGVMSVSAGGDTFKVEVKGTYADGTPNGNGSAILYNGYEWRGNVKVGEANLRQVFAAIDGQMKGRMFEAEHDERGLDFSASKA- : UniRef90_Q1I9C7
UniRef90_A0A024HHX9 : PDAKT--LDGAWSFAGHMPGKGDVSGVMTVASSGDDFKVSVKGKYADGSADGEGSALLYNGYEWRGNVKIGDVTMRQVFAAMKGQMQGRMFDKAHDERGIDFVAAK-- : UniRef90_A0A024HHX9
UniRef90_UPI00046A6429 : -RPDAAKLAGEWSFSGHVPSKGDVRGVMTATVSDKDFDVSLKGEYADGTPNGSGSAILFNGYEWRGNLEVEGVAMRQVLAATAGEIRGRMFETEHDERGLDFVAAK-- : UniRef90_UPI00046A6429
UniRef90_L1LTM3 : --PKSASLAGDWSFSGHLPGRGELNGVMKVTADGDRFKVSLDGQYADGKPKGEGSAVLYSGYEWRGTVTVDGVSMRQVLAANNGQLSGRMFDKAHDERGLDFTAAQ-- : UniRef90_L1LTM3
UniRef90_UPI0003A1CB62 : -RPAPTALVGRWSFSGHMPTRGDLHGVMSVEGGGDNFRISLDGRYADGKPKGKGSAILFTGHEWRANVEIDGVAMRQVFSVVNGEMKGRMFETEHDERGLDFVAAKSD : UniRef90_UPI0003A1CB62
UniRef90_J7JJ77 : --PPATALAGTWSFGGHMPGKGDAYGTMTVKGSGDRFDVELKGRFADGSPSGTGTATLYTGYEWRASVKVGDTTMRQVLMASNGALRGRMFDDAHDERGLDFSAAK-- : UniRef90_J7JJ77
UniRef90_UPI00025580A3 : ---AEAPVDGDWTLAGHMPGKGAFHARMQVTPADDQYRLTLTGEYADGSAKGEGQAVVYTGYEWRANIEIDGQVMRQVFALKDGQLSGRMFLRDKDEVGADVVAAR-- : UniRef90_UPI00025580A3
UniRef90_Q2BKZ1 : -KAKKMPLNGQWSFTANMPGKGVLRGVMSIQGGKKDYTVKVDGEYADGSAKGKGSAIVYTGYEWRANLTIDGVSMRQVFAADGTELTGRMFETIHDEKGMDFSAVKA- : UniRef90_Q2BKZ1
UniRef90_D0D5G8 : PEAFSGDLSGRYVVAGRQPGRGAYSGSMELAASDAGYDVTLELSFADGSETYTGTGLVYGAGEWRATLSAGDVTIRQVMALEGAELSGRWFVAGEDATGGDIVARAED : UniRef90_D0D5G8
UniRef90_UPI00046369E4 : PKASTANLAGDWVVAGHKPGRGDYSGKLSLVASKDGYDVKMTLNYAKGSETYKGRGVLLGEGEWRASLSNGKSDVRQVLALADGALEGRWFETKNEVSGGRLAA---- : UniRef90_UPI00046369E4
UniRef90_N6XFL7 : -QARAPQVVGEWSMSGHMSGRGGFSGVMKVSAAKDLYALSFDGRWDDGSASGKGQALLYTGYEWRGDLVVDGTPMRQVFALEDGVLRGRMFLRDQDEIGADVVA---- : UniRef90_N6XFL7
UniRef90_Q3KBY9 : PKAANAKLSERWVVTGHQPGSGDYSGTLSLKSGEEGYDVSMTLENKAGSATYQGRGVLLGEGEWRATLSDGKQEIRQVFALADGSLTGRWFEKSNEVIGGRFIASPVD : UniRef90_Q3KBY9
UniRef90_X6KXB9 : -EAFGGDLSGAYVVTGHEPGRGAYSGTLELTCADGGYDASMTLDYGDGSETYTGSGVIYGAGEWRATLSSGETTIRQVMALQDGMLSGRWFVADRDPVGGRLTA---- : UniRef90_X6KXB9
UniRef90_UPI000478221C : ---AKPSLSGTWSVAGFMPGKGDYSAVLQTKESKDNFSVSMKGHYADGTPQGEGSAKVFAGYEWRASLTIDGIKMRQVMAAEDGSLSGRMFQSAHDEIGGELTAV--- : UniRef90_UPI000478221C
UniRef90_UPI000363B5D3 : ---KSVPVSGSWSFSAQMAGKGDVRGVMSISGGKDDYSVSIDGEYADGSAKGSGTAIVYTGYEWRANLTVDGVAMRQVFALDGSELNGRMFEAVHDEAGMDFSALRS- : UniRef90_UPI000363B5D3
UniRef90_UPI0003751F1E : ---KPADASGSWRLVGHKPGTGAYEGTATVKRTGNDYSVSMTVRYENGTEQLTGSALVYTGHEWRATLKSGEREINQVMTLADGSLSGRWFESGYDAIGGTLRAVRAD : UniRef90_UPI0003751F1E
UniRef90_U7DH17 : ---AKSSAAGKWRVVGHRPGWGSYEGVATITGENDHYTLDMEINYANGTEKGNGKAIVYTGYEWRANIKQGELQVAQVFQLDGKSLSGRWHEVGVDSIGGQFKAARID : UniRef90_U7DH17
UniRef90_Q5P0U9 : -SAQHRPATGSWVVAGERPGWGAYTGTMTARAAGDRYEVSYELRFGVGNTVGQGDAIVYTGYEWRGSAKLGNEDTRSIFALDGSRMSGRWFLKGADEIGARFEAVRAD : UniRef90_Q5P0U9
UniRef90_UPI0003813964 : PPAADLDLSGEWPVAGRQPGRGDYAGLLTLTATESGYDAALRLDFADGSESFTGSGALYGAGEWRASLASPEREIRQVFALEGGVLEGRWFELGRDVIGGRLTAARA- : UniRef90_UPI0003813964
UniRef90_N6YQ68 : ---APQAVEGVWSLSGHMTGRGGFSGVMKVSAGKDIHALSFEGRWDDGKPAGKGQALIYTGYEWRADLVVDGTPMRQVFALEDGVLRGRMFLRDHDEVGADVVA---- : UniRef90_N6YQ68
UniRef90_UPI00047812AA : ------SAAGQWRVVGHRPGWGAYEGQATISSNGDDYSIKLTLNYANGQETAEGKAVLYTGYEWRATVKQGDMNVRQVFTLDGQTLSGRWYQAGIDAIGGRFEAVR-- : UniRef90_UPI00047812AA
UniRef90_Q5P5Q6 : ---KPADASGTWRLVGHRPGMGAYEGTATIARTGDDYSVDMVMRYENGTDTAKGTAIVYTGHEWRASVKQGDREVNHVMSLGAGELSGRWFEANNDSIGGTMRAVRAD : UniRef90_Q5P5Q6
UniRef90_A1K4V1 : -RARAPQAAGEWSVSGRMAGRGAFTATMRVAAGKDQYTLALAGRWDDGAPQGEGAAVIYTGYEWRADLQLDGQPMRQVFALDKGVLRGRMFLRDQDEVGADVVAGRVE : UniRef90_A1K4V1
UniRef90_UPI000368D9AB : --AKHKPADGRWIVAGERPGWGAYTGTMTATAKGKDYEVSYELHFGPGNTVGKGESLVYTGYEWRGTAQLGNEHTQSIFALDGARMSGRWFLRKSEEIGATFEAVRAD : UniRef90_UPI000368D9AB
UniRef90_Q2BHT3 : -KAKKAALNGQWAVSGFVPDKGEFTAVMSVMPQKDNYITLINGHYADGSKTGSGSATVFTGYEWRGAIVIDGRKMRQVFAADGKQMAGRMYLKNDEVMGGRVLAEKAD : UniRef90_Q2BHT3
UniRef90_UPI000255846C : --ADKSDLMGRWRVTGFVPGKGEFDAWMSAAKTGAGYDLDIEGTYADGSKSGKGNATVYTGFEWRASLTIDGVKMRQVMAADGNNMEGRMFPAAERRVGGDLMAVR-- : UniRef90_UPI000255846C
UniRef90_H0PVH4 : ---KHRPADGRWVVAGERPGWGAYTGTMTAVPKGKDYEVRYELRFGAGNTVGHGDAVIYTGYEWRGSARLGNEDTRSVFAMEDGRIAGRWFLKNAEEIGASFEAVRAD : UniRef90_H0PVH4
UniRef90_K9GSF6 : PEASTADLSGTWSVAGVQRGQGPYHGTMTVSKDGGMLDVMVDLTYENGTETQAGTGMLYGAGEWRASLTGAGTQLRQVMALEDGELTGRWFDADQDVIGGAMTAVKTD : UniRef90_K9GSF6
UniRef90_M2ZLG3 : ----SPNLAGDWAVAGHRPGKGDYWGRMEVKRAADSYRLSYRLTWADGTETGEGRSVVYTGFEWRGSTRLGAEQVSEVLSADGGRLEGRWYLDDQDAVGATMVAVR-- : UniRef90_M2ZLG3
UniRef90_N6XWW4 : -----ASAAGTWRFVGHRPGRGAYEGVATIEAGADRYKVKFRFDYADGQETAEGEAILYTGYEWRASVKQGGMDVRQVFTLDGQTLSGRWYENGIDAIGGRLLAARS- : UniRef90_N6XWW4
UniRef90_UPI0004743A29 : ---KHALPTGSWRIAGHRPGWGDYAGYMQVDALGSDYDVRYELNYAAGNRVGHGQSIIYSGYEWRGDATLGNEKVRTVLALDGKKLSGRWFLRETDEVGATFEAVQA- : UniRef90_UPI0004743A29
UniRef90_A0NPA8 : -EAQKPQATGRWVFATSLPEKGDAYGALEVTGDSQPYSVSGTLMTVDGEETLEGKLNVYTGYEWRANLDIGGEKYRQILAIEDGSLSGRQFVHAEDSLGGSFKAARA- : UniRef90_A0NPA8
UniRef90_V9VTL2 : ----KQPVAGDWVVITDLPGIGEAYGRLTVTGDASPYQVSGDFVTADGTKPASGRMNLYTGYEWRANLDIGGTAYRQVLALDGNGLQGRQFDRSNDALGAPLTGARA- : UniRef90_V9VTL2
UniRef90_T0IW33 : ---RAPRLAGDWLVTASVPGQGRYVGTMTVTAAADEFGTRVTLQPIAGGATRSGTGLVYAGYSWRGTSKGGGSPAREWFAPDQQSAQGRWFWGDYQEFGYDVKLVRA- : UniRef90_T0IW33
UniRef90_F2J2J9 : -EAAKPTALGDWTFVTRLPGKGEAYGTLTVSGDAQPYAVAGTLKTAAGEEAVSGRLNLYTGYEWRANLTVGDTLYRQVLALDGATVAGRQFLHAEDSLGAPFRAVRA- : UniRef90_F2J2J9
UniRef90_C4KB05 : --APRTALDGSWRIAGFLPGKGAFEGRMRASAAGEDYELAIEGRYADGALSGRGVATVYTGYEWRGSVDIDGVALRQVMAADGERMHGRQHFADSRRMGGALSALR-- : UniRef90_C4KB05
UniRef90_A8ES16 : -------LPKKWIMSGHTPIIGDFTANLTLKSADESYGMLIDYKYANGKEKTTGVAIVYGKTELRASFEVDGVKYRQILHIDPNTLEGRMFEVLHSENGSTLVGKEKD : UniRef90_A8ES16
UniRef90_W0AE11 : PRIRTPYLAGKWLVSAHLPGRGDYVGELTVAKSADEFVTGATLRSLSTGETLTGTGLVYGGYSWRGRSKGPNRETREWFAPDQKSGEGRWFWGEYNEFGFDVALTRA- : UniRef90_W0AE11
UniRef90_UPI000287C497 : -QAEAPDPEGDWQLWGHWPGEGDFYADVNITAGEGEYTLTLAGAFTNGRPTGEGRAIVYTGYEWRANLELNGRGFQQVLDLSGERPSGRIFDDRDEAFGMQVE----- : UniRef90_UPI000287C497
UniRef90_UPI00035C7A9E : --ANKPDPVGSWVVSSSIAGVGPVFGVMTASPKEGVLHLEGNLQSLDGTYPLKGTVNIYTGYEWRASVSLGEQAYRQILALEDGKLEGRHFAKGQDNLSTVFKAAK-- : UniRef90_UPI00035C7A9E
UniRef90_Q2G3W0 : ---QSSKLGGRWLVSASLPGKGKYVGEMVLAASGDDYSTTISLKSADGSTTRKGKGLVYTGYAWRGTSASGDHETRETMWFSPDRAEGRWFWGDYKEFGFDVKLTRA- : UniRef90_Q2G3W0
UniRef90_A0A013VTV5 : -----PRLAGEWLVVASAPGQGRFVGAFSVKKSADEFVTSSTLKSLNGTVSRSGTGIVYAGYSWRGSSKGAATAAREWFAPDQQNAQGRWYWGDYQEFGLDVKLIRA- : UniRef90_A0A013VTV5
UniRef90_UPI0003091879 : -----PRLVGEWLVVASAPGQGRFVGSFSIKKAADEFLTSSVLRSLNNGASRSGAGIVYAGYSWRGSSKGAAVAGRMWFAPDQQSAVGRWYWGDYQEFGLDVKLTRA- : UniRef90_UPI0003091879
UniRef90_G2HTM9 : ------KLPTKWITHGYTPSIGDFTAILTIESSDESYAMLMDYKYANGQEKARGIAVAYNKTEIRASFELNGVVYRQILHLDPNSFEGRMFESLHTEQGSILTG---- : UniRef90_G2HTM9
UniRef90_UPI00047DE1B5 : PSMRAPILTGKWFVSAAFGGHGRFVGEMDLAAGSDEFTSTTTLKSLDDGKTRKGVGLVYAGYSWRGTSQGEGDKMRETMWFEPDQAKGRWYWGEYHEFGLDVTLTR-- : UniRef90_UPI00047DE1B5
UniRef90_UPI00046CC1F0 : -KAPKADLSGEWVVLGYEPGKGTYRGTARWKAGGGEASVTGTLWFSDGTEAFRGAGTVYGGYALRTRTRHNGFETRGAFTLDGDVIRGQHHFPAPD------------ : UniRef90_UPI00046CC1F0
UniRef90_UPI00036143A4 : -KPSKNSLPASWLILGYEPIKGNYRGQASLKKTAGDYAVVGNLQYADNTESFSGDASLYGGSAFRTNLERNGFKTTGAFAFADGMLRGQH------------------ : UniRef90_UPI00036143A4
UniRef90_F1Z7Z0 : -QPHEAHLAGKWLISANLPGKGEWFGTMDVTGGSEQFATRIALHGGGAGIASSGNGVVYGGYSWRGRADAPDQPLREVFSADGKSAAGRWFWGEYQEFGYDVELIRAD : UniRef90_F1Z7Z0
UniRef90_I0U9P6 : ------KLEGRWRIVGYRPGIGMYSGYAEFQRKGEDFYENRTMLMPDGTETYKGNVRIFTGYSLRSSLEGKNKKLRGVFNIQDGTIKGHW------------------ : UniRef90_I0U9P6
UniRef90_K6D9E5 : ---KKYDITGEWKIIGYSPSMGLYSGDATVTAKDNHFYEKRSLMREGKTTNYEGNVNLYTGYSLRSSLGNENEKLRGVFNVDGKSIAGQW------------------ : UniRef90_K6D9E5
UniRef90_K0NIJ8 : ---KDQDLTGQWNVAGYQPGMGYYQGVYTIAKGEDEYFIEKKIQYKSGNISTKGEGTLFSEYHLR-------------YALAPTPLTGRVFDLNADTMGF-------- : UniRef90_K0NIJ8
UniRef90_U1Y637 : -KGKNQQVDGKWKVVGFQGTKGAYVGDSEFMSTDGKLTEKKSVHYLDQNVSLQSTGNVYSGYALRMQYEQAGKKLRGTFNVDGKTITGDWSDANN------------- : UniRef90_U1Y637
UniRef90_UPI0002EE5D61 : -KGRENDLQGKWKVAGFQGTKGFYLGESQFKKTESGYKEQKQIQFSKASVQLEGEIKLYGGFMVRADYKAAGRELKGTYNVQGNVIEGDWSEK--------------- : UniRef90_UPI0002EE5D61
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101----- :
OrigSeq : PDAYADDASGAYVLAGRQPGRGDYTGRLVLKKAGEDYEVTMTLDFADGSRSFSGTGRILGAGEWRATLSDGTVTIRQIFALQDGRFSGRWHDADSDVIGGRLAAVKAD : OrigSeq
Jnet : ----------EEEEEEE----EEEEEEEEEEE----EEEEEEEEE-----EEEEEEEEE---EEEEEE----EEEEEEEE----EEEEEEE---------EEEEEE-- : Jnet
jhmm : ----------EEEEEEE----EEEEEEEEEEE----EEEEEEEEE----EEEEEEEEEE---EEEEE-----EEEEEEEE----EEEEEEE-----EE--EEEEEE-- : jhmm
jpssm : ----------EEEEEEE-----EEEEEEEEE-----EEEEEEEEE------EEEEEEEEE--EEEEEEE----EEEEEEE----EEEEEEEE--------EEEEE--- : jpssm
Lupas 14 : ------------------------------------------------------------------------------------------------------------ : Lupas 14
Lupas 21 : ------------------------------------------------------------------------------------------------------------ : Lupas 21
Lupas 28 : ------------------------------------------------------------------------------------------------------------ : Lupas 28
Jnet_25 : -------B-B-BBBBBBBBB-B-BBBBB-B------B-B-B-B-B------B-B-B-BBBBBBBBB-B------BBBBBBB----B-BBBBB----BBBB-B-B---- : Jnet_25
Jnet_5 : -----------B-B-B-------B-B-B-B--------B---B------------B-BBB---B-B--------B--BB------B---------------B-B---- : Jnet_5
Jnet_0 : ---------------B---------B-B---------------------------B-----------------------------------------------B---- : Jnet_0
Jnet Rel : 898877777448898715888158888999618886178888986378812588999873764899921587068999864887078988615776115068884089 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.