SILENT_MODE BLOCK_FILE jp_s9CpazD.concise.blc MAX_NSEQ 165 MAX_INPUT_LEN 167 OUTPUT_FILE jp_s9CpazD.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 471 154 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 155 471 164 H SPACE SUB_CHARS 1 155 471 164 E SPACE SUB_CHARS 1 155 471 164 - SPACE STRAND 46 158 57 COLOUR_TEXT_REGION 46 158 57 158 51 STRAND 63 158 66 COLOUR_TEXT_REGION 63 158 66 158 51 STRAND 72 158 75 COLOUR_TEXT_REGION 72 158 75 158 51 STRAND 79 158 79 COLOUR_TEXT_REGION 79 158 79 158 51 STRAND 93 158 94 COLOUR_TEXT_REGION 93 158 94 158 51 STRAND 100 158 105 COLOUR_TEXT_REGION 100 158 105 158 51 STRAND 114 158 118 COLOUR_TEXT_REGION 114 158 118 158 51 STRAND 149 158 158 COLOUR_TEXT_REGION 149 158 158 158 51 STRAND 180 158 185 COLOUR_TEXT_REGION 180 158 185 158 51 STRAND 190 158 206 COLOUR_TEXT_REGION 190 158 206 158 51 STRAND 237 158 241 COLOUR_TEXT_REGION 237 158 241 158 51 STRAND 246 158 254 COLOUR_TEXT_REGION 246 158 254 158 51 STRAND 288 158 295 COLOUR_TEXT_REGION 288 158 295 158 51 STRAND 302 158 305 COLOUR_TEXT_REGION 302 158 305 158 51 STRAND 329 158 338 COLOUR_TEXT_REGION 329 158 338 158 51 STRAND 343 158 357 COLOUR_TEXT_REGION 343 158 357 158 51 STRAND 364 158 369 COLOUR_TEXT_REGION 364 158 369 158 51 STRAND 374 158 385 COLOUR_TEXT_REGION 374 158 385 158 51 STRAND 392 158 398 COLOUR_TEXT_REGION 392 158 398 158 51 STRAND 411 158 415 COLOUR_TEXT_REGION 411 158 415 158 51 STRAND 422 158 434 COLOUR_TEXT_REGION 422 158 434 158 51 STRAND 453 158 463 COLOUR_TEXT_REGION 453 158 463 158 51 HELIX 7 158 14 COLOUR_TEXT_REGION 7 158 14 158 50 HELIX 122 158 136 COLOUR_TEXT_REGION 122 158 136 158 50 HELIX 159 158 167 COLOUR_TEXT_REGION 159 158 167 158 50 HELIX 258 158 269 COLOUR_TEXT_REGION 258 158 269 158 50 HELIX 277 158 285 COLOUR_TEXT_REGION 277 158 285 158 50 HELIX 309 158 317 COLOUR_TEXT_REGION 309 158 317 158 50 STRAND 46 163 57 COLOUR_TEXT_REGION 46 163 57 163 51 STRAND 63 163 65 COLOUR_TEXT_REGION 63 163 65 163 51 STRAND 72 163 75 COLOUR_TEXT_REGION 72 163 75 163 51 STRAND 78 163 80 COLOUR_TEXT_REGION 78 163 80 163 51 STRAND 100 163 105 COLOUR_TEXT_REGION 100 163 105 163 51 STRAND 114 163 118 COLOUR_TEXT_REGION 114 163 118 163 51 STRAND 149 163 159 COLOUR_TEXT_REGION 149 163 159 163 51 STRAND 181 163 185 COLOUR_TEXT_REGION 181 163 185 163 51 STRAND 190 163 206 COLOUR_TEXT_REGION 190 163 206 163 51 STRAND 237 163 240 COLOUR_TEXT_REGION 237 163 240 163 51 STRAND 246 163 254 COLOUR_TEXT_REGION 246 163 254 163 51 STRAND 288 163 295 COLOUR_TEXT_REGION 288 163 295 163 51 STRAND 302 163 305 COLOUR_TEXT_REGION 302 163 305 163 51 STRAND 329 163 337 COLOUR_TEXT_REGION 329 163 337 163 51 STRAND 343 163 358 COLOUR_TEXT_REGION 343 163 358 163 51 STRAND 364 163 369 COLOUR_TEXT_REGION 364 163 369 163 51 STRAND 374 163 385 COLOUR_TEXT_REGION 374 163 385 163 51 STRAND 392 163 399 COLOUR_TEXT_REGION 392 163 399 163 51 STRAND 411 163 415 COLOUR_TEXT_REGION 411 163 415 163 51 STRAND 421 163 434 COLOUR_TEXT_REGION 421 163 434 163 51 STRAND 453 163 462 COLOUR_TEXT_REGION 453 163 462 163 51 HELIX 7 163 14 COLOUR_TEXT_REGION 7 163 14 163 50 HELIX 123 163 136 COLOUR_TEXT_REGION 123 163 136 163 50 HELIX 160 163 167 COLOUR_TEXT_REGION 160 163 167 163 50 HELIX 258 163 269 COLOUR_TEXT_REGION 258 163 269 163 50 HELIX 278 163 285 COLOUR_TEXT_REGION 278 163 285 163 50 HELIX 309 163 317 COLOUR_TEXT_REGION 309 163 317 163 50 STRAND 46 164 56 COLOUR_TEXT_REGION 46 164 56 164 51 STRAND 64 164 66 COLOUR_TEXT_REGION 64 164 66 164 51 STRAND 73 164 74 COLOUR_TEXT_REGION 73 164 74 164 51 STRAND 92 164 95 COLOUR_TEXT_REGION 92 164 95 164 51 STRAND 100 164 106 COLOUR_TEXT_REGION 100 164 106 164 51 STRAND 114 164 118 COLOUR_TEXT_REGION 114 164 118 164 51 STRAND 149 164 154 COLOUR_TEXT_REGION 149 164 154 164 51 STRAND 179 164 186 COLOUR_TEXT_REGION 179 164 186 164 51 STRAND 191 164 200 COLOUR_TEXT_REGION 191 164 200 164 51 STRAND 203 164 207 COLOUR_TEXT_REGION 203 164 207 164 51 STRAND 237 164 241 COLOUR_TEXT_REGION 237 164 241 164 51 STRAND 246 164 253 COLOUR_TEXT_REGION 246 164 253 164 51 STRAND 288 164 295 COLOUR_TEXT_REGION 288 164 295 164 51 STRAND 303 164 305 COLOUR_TEXT_REGION 303 164 305 164 51 STRAND 329 164 339 COLOUR_TEXT_REGION 329 164 339 164 51 STRAND 343 164 355 COLOUR_TEXT_REGION 343 164 355 164 51 STRAND 363 164 369 COLOUR_TEXT_REGION 363 164 369 164 51 STRAND 374 164 385 COLOUR_TEXT_REGION 374 164 385 164 51 STRAND 392 164 396 COLOUR_TEXT_REGION 392 164 396 164 51 STRAND 411 164 416 COLOUR_TEXT_REGION 411 164 416 164 51 STRAND 422 164 434 COLOUR_TEXT_REGION 422 164 434 164 51 STRAND 441 164 441 COLOUR_TEXT_REGION 441 164 441 164 51 STRAND 453 164 459 COLOUR_TEXT_REGION 453 164 459 164 51 STRAND 461 164 463 COLOUR_TEXT_REGION 461 164 463 164 51 STRAND 465 164 469 COLOUR_TEXT_REGION 465 164 469 164 51 HELIX 6 164 13 COLOUR_TEXT_REGION 6 164 13 164 50 HELIX 122 164 136 COLOUR_TEXT_REGION 122 164 136 164 50 HELIX 155 164 167 COLOUR_TEXT_REGION 155 164 167 164 50 HELIX 258 164 269 COLOUR_TEXT_REGION 258 164 269 164 50 HELIX 276 164 285 COLOUR_TEXT_REGION 276 164 285 164 50 HELIX 309 164 317 COLOUR_TEXT_REGION 309 164 317 164 50