Jpred secondary structure prediction results

QUERY           : DEIGDAAKKLGDASYAFAKEVDWNNGIFLQAPGKLQPLEALKAIDKMIVMGAAADPKLLKAAAEAHHKAIGSISGPNGVTSRADWDNVNAALGRVIASVPENMVMDVYDSVSKITDPKVPAYMKSLVNGADAEKAYEGFLAFKDVVKKSQVTSAAG : QUERY 
UniRef90_Q8GTI2 : DEIGDAAKKLGDASYSFAKEVDWNNGIFLQAPGKFQPLEALKAIDKMIEMGAAADPKLLKEAAEAHHKAIGSISGPNGVTSRADWDAVNAALGRVVASVPKAKVMAVYDSVKDITDPTVPVYMKSLVNGPDAEKAYQAFLEFKDVVAKNQVTTASA : UniRef90_Q8GTI2
UniRef90_Q8GTI2 : DKIGVAAKALSDASYPFIKDIDWLSDIYLKPLPGKTAPETLKAIDKMIVMGAKMDGNLLKAAAEAHHKAIGSIDA-KGVTSTD------------------------------------------------------------------------- : UniRef90_Q8GTI2
UniRef90_O00941 : DEIGDAAKKLGDSSYAFAKEVDWNNGIFLQAPGKFQPLEALKAIDKMIVMGVQADPKLLKAAADAHHKAIGSISGPNGVTSRADWDSVNAALGRVIASVPEATVMDVYNSVSGITDPAVPAYMKSLVNGADAEKAYEGFLAFKDVVKRSQVSTAAA : UniRef90_O00941
UniRef90_O00941 : DAIGEAAKKLSEQSYPFLKDINWLSDIYLKPLPDATISKKAIAIDKMIMMGAKADGNLLKAAAQAHHQAIGSIDA-NGVTSLADYSAVNAALGRVVASVPKKMVMDVYNSMASLVAPTVPNNMFASVNPLDANAAAKAFYTFKDVVQAAS------ : UniRef90_O00941
UniRef90_P80484 : DEIGDAAKKLGDASYAFAKEVDWNNGIFLQAPGKLQPLEALKAIDKMIVMGAAADPKLLKAAAEAHHKAIGSVSGPNGVTSRADWDNVNAALGRVIASVPENMVMDVYDSVSKITDPKVPAYMKSLVSGADAEKAYEGFLAFKDVVKKSQVTSAAG : UniRef90_P80484
UniRef90_P80484 : DKIGVAAQQLSEASYPFLKEIDWLSDVYMKPLPGVSAQQSLKAIDKMIVMGAQADGNALKAAAEAHHKAIGSIDA-TGVTSAADYAAVNAALGRVIASVPKSTVMDVYNAMAGATDTSIPLNMFSKVNPLDANAAAKAFYTFKDVVQAAQ------ : UniRef90_P80484
UniRef90_Q9FEY3 : DKIDDAAKKLSEASYPFLKEIDWSSDVYGKLPTA-NPFLVLKAVDKMIVMGAAMDSAALKAGAEAHHKAIGSIDA-KGVTTLADYEAVNAAIGHMVASAGESKTMDVYNALAGFNLGKVGPYMMSKVNAADASAAYKAFLEFKDAVKASQ------ : UniRef90_Q9FEY3
UniRef90_G9I8P4 : DKIDDAAKVLSEKSYPFLKEIDWTSDVYAKLPTQ-KPVAVMEAINKMLVMGAAMDSEALKKGVLAHAKAIDGMDS-KLVATLDDYTAINSAIGHMIASVPASKTMDVYNAFAKFSGSDVGPYMMSKVNAADAKAAYEALLAFKDVVKASQ------ : UniRef90_G9I8P4
UniRef90_Q8GSK1 : DKIGTAAKALSDASYPFIKDIDWLSDVYLKPLPGKTAPETLKAIDKMIVMGSKMDGNLLKAAAEAHHKAIGSIDA-KGVTSPEDYEAVNAALGRIVASVPKQTVMDVYNSMAKVVDPSVTNNMFSKVNPLDALSAARGFYTFKDVVEAVQ------ : UniRef90_Q8GSK1
UniRef90_Q8GSK1 : ----------------------------------------------MIEMGAAADPELLKKAADAHHKAIGSISGPNGVTSRADWDAVNAALGRVVASVPKQKVMDVYDAVKDITDPKVPAYMKSLVNGADAEKAYQGFLEFKDVVAANQVTTASA : UniRef90_Q8GSK1
UniRef90_P80483 : DGIADASKKFSDATYPIAEKFDWGGSSYIADASASNPRQAALAVEKLLETGLTMDPKLVRAAVAAHSKALDTVSNPKLVASKEDFAAVNEALARMIASADKQKFAALRTAFPESRELQSSLFAGN--NGYEAEKAYDSFKALTSAVRDASINGANA : UniRef90_P80483
UniRef90_P80483 : --VGRAAKKFSEATYPIMEKLNWVKSKYLATASSKDPKMMAPGIDKTLEVALTMNQNLINNAVYAHVRAIGALNTPGFVAERDDFARVNLALAKMIGSADPAKFKALLTAFPGNADLQMALFAA---NPEQAKAAYETFVALTSAV---------- : UniRef90_P80483
UniRef90_Q8GTH2 : DKIGTAAKALSDASYPFIKDIDWLSDIYLKPLPGKTAPETLKAIDKMIVMGSKMDGNLLKAAAEAHHKAIGSIDA-KGVTSPEGYEAVNAALGRIVASVPKQTVMDVYDSMAKIVDSSVTNNMFSTVNPLDALSAAKGFYTF-------------- : UniRef90_Q8GTH2
UniRef90_Q8H1K6 : DEIGDAAKKLGDASYSFAKEVDWSNGIFLQAPGKFQPLKALKAIDKMIEMGAAADPKLLKEAAEAHHKAIGSISGPNGVTSR-------------------------------------------------------------------------- : UniRef90_Q8H1K6
UniRef90_S0DE72 : -----------------------------------------------------MDPAYLKEGALAHAKAIGNVDA-KGVLPLDDLIAINSAIGHMIKSSGESSTMGTFNAFKGILPDYIPFYLLSSVNPLDAKEAYDALLQFKDVVKAS------- : UniRef90_S0DE72
UniRef90_Q9FEY2 : --------------------------------------------DKMIVMGAAMDSAALKAGAEAHHKAIGSIDA-KGVTTLADYEAVNAAIGHMVASAGESKTMDVYNAFAGFNLGKVGPYMMSKVNAADASAAYKAFLEFKDAVKASQ------ : UniRef90_Q9FEY2
UniRef90_B6SBJ7 : -----------------------------------------------------------------HVRAIGALNTPGFVAERDDFARVNLALAKMIGSADPAKFKALLTAFPGNADLQMALFAAN--NPEQAKAAYETFVALTSAVAAS------- : UniRef90_B6SBJ7

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151--- :
OrigSeq         : DEIGDAAKKLGDASYAFAKEVDWNNGIFLQAPGKLQPLEALKAIDKMIVMGAAADPKLLKAAAEAHHKAIGSISGPNGVTSRADWDNVNAALGRVIASVPENMVMDVYDSVSKITDPKVPAYMKSLVNGADAEKAYEGFLAFKDVVKKSQVTSAAG : OrigSeq

Jnet            : --HHHHHHHHH---HHHHHH----------------HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHH------HHHHHHHHH---------HHHHH----HHHHHHHHHHHHHHHHHHHH------- : Jnet
jhmm            : --HHHHHHHHHH--HHHHHH----------------HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHH-------HHHHHHHH---------HHHHH----HHHHHHHHHHHHHHHHHHH-------- : jhmm
jpssm           : --HHHHHHHH-----HHHHH------EE--------HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH---------------HHHHHHHHHHHH-----HHHHHHHHH----------HHHH-------HHHHHHHHHHHHHHHHHH------- : jpssm

Lupas 14        : ------------------------------------------------------------------------------------------------------------------------------------------------------------ : Lupas 14
Lupas 21        : ------------------------------------------------------------------------------------------------------------------------------------------------------------ : Lupas 21
Lupas 28        : ------------------------------------------------------------------------------------------------------------------------------------------------------------ : Lupas 28

Jnet_25         : --B--BB--B---BB-BB--B-B----BB--B----B--BB-BB--BB-BBB-B-B-BB--BB-BBB-BB--B----BBB---BB--BB-BBB-BB-BB----B--BB-BB--B----BBBBBBB-B-B--B--BB-BB--B--BB--B-B----- : Jnet_25
Jnet_5          : ----------------BB---------BB-----------B--B--BB--B-------B--BB-----B---B-----B-----B--B--BBB-BB-------B--B---B-------B---B--------B--B---B--B---B---------- : Jnet_5
Jnet_0          : --------------------------------------------------B-------B----------------------------B---B---------------------------------------------------------------- : Jnet_0
Jnet Rel        : 982899997531763244305777741015787763789999999999998612368999999999874167877777776124789999999874378743189998752678777653132124677133899999999986888603788999 : Jnet Rel


Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.