SILENT_MODE BLOCK_FILE jp_85SQkFN.concise.blc MAX_NSEQ 220 MAX_INPUT_LEN 222 OUTPUT_FILE jp_85SQkFN.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 101 209 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 210 101 219 H SPACE SUB_CHARS 1 210 101 219 E SPACE SUB_CHARS 1 210 101 219 - SPACE STRAND 35 213 41 COLOUR_TEXT_REGION 35 213 41 213 51 STRAND 72 213 76 COLOUR_TEXT_REGION 72 213 76 213 51 STRAND 82 213 86 COLOUR_TEXT_REGION 82 213 86 213 51 STRAND 93 213 95 COLOUR_TEXT_REGION 93 213 95 213 51 HELIX 8 213 18 COLOUR_TEXT_REGION 8 213 18 213 50 HELIX 44 213 55 COLOUR_TEXT_REGION 44 213 55 213 50 HELIX 67 213 71 COLOUR_TEXT_REGION 67 213 71 213 50 STRAND 25 218 26 COLOUR_TEXT_REGION 25 218 26 218 51 STRAND 35 218 42 COLOUR_TEXT_REGION 35 218 42 218 51 STRAND 69 218 76 COLOUR_TEXT_REGION 69 218 76 218 51 STRAND 82 218 86 COLOUR_TEXT_REGION 82 218 86 218 51 STRAND 93 218 96 COLOUR_TEXT_REGION 93 218 96 218 51 HELIX 7 218 16 COLOUR_TEXT_REGION 7 218 16 218 50 HELIX 44 218 56 COLOUR_TEXT_REGION 44 218 56 218 50 HELIX 68 218 68 COLOUR_TEXT_REGION 68 218 68 218 50 STRAND 35 219 41 COLOUR_TEXT_REGION 35 219 41 219 51 STRAND 75 219 76 COLOUR_TEXT_REGION 75 219 76 219 51 STRAND 81 219 87 COLOUR_TEXT_REGION 81 219 87 219 51 STRAND 93 219 94 COLOUR_TEXT_REGION 93 219 94 219 51 HELIX 11 219 19 COLOUR_TEXT_REGION 11 219 19 219 50 HELIX 45 219 53 COLOUR_TEXT_REGION 45 219 53 219 50 HELIX 67 219 74 COLOUR_TEXT_REGION 67 219 74 219 50