SILENT_MODE BLOCK_FILE jp_SSTcD8s.concise.blc MAX_NSEQ 670 MAX_INPUT_LEN 672 OUTPUT_FILE jp_SSTcD8s.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 261 659 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 660 261 669 H SPACE SUB_CHARS 1 660 261 669 E SPACE SUB_CHARS 1 660 261 669 - SPACE STRAND 22 663 27 COLOUR_TEXT_REGION 22 663 27 663 51 STRAND 37 663 39 COLOUR_TEXT_REGION 37 663 39 663 51 STRAND 59 663 66 COLOUR_TEXT_REGION 59 663 66 663 51 STRAND 82 663 87 COLOUR_TEXT_REGION 82 663 87 663 51 STRAND 107 663 112 COLOUR_TEXT_REGION 107 663 112 663 51 STRAND 216 663 221 COLOUR_TEXT_REGION 216 663 221 663 51 STRAND 229 663 231 COLOUR_TEXT_REGION 229 663 231 663 51 STRAND 235 663 241 COLOUR_TEXT_REGION 235 663 241 663 51 STRAND 253 663 259 COLOUR_TEXT_REGION 253 663 259 663 51 HELIX 5 663 18 COLOUR_TEXT_REGION 5 663 18 663 50 HELIX 168 663 169 COLOUR_TEXT_REGION 168 663 169 663 50 HELIX 180 663 186 COLOUR_TEXT_REGION 180 663 186 663 50 HELIX 243 663 247 COLOUR_TEXT_REGION 243 663 247 663 50 STRAND 22 668 27 COLOUR_TEXT_REGION 22 668 27 668 51 STRAND 36 668 39 COLOUR_TEXT_REGION 36 668 39 668 51 STRAND 59 668 66 COLOUR_TEXT_REGION 59 668 66 668 51 STRAND 82 668 87 COLOUR_TEXT_REGION 82 668 87 668 51 STRAND 108 668 112 COLOUR_TEXT_REGION 108 668 112 668 51 STRAND 216 668 221 COLOUR_TEXT_REGION 216 668 221 668 51 STRAND 230 668 231 COLOUR_TEXT_REGION 230 668 231 668 51 STRAND 235 668 241 COLOUR_TEXT_REGION 235 668 241 668 51 STRAND 253 668 259 COLOUR_TEXT_REGION 253 668 259 668 51 HELIX 5 668 19 COLOUR_TEXT_REGION 5 668 19 668 50 HELIX 165 668 171 COLOUR_TEXT_REGION 165 668 171 668 50 HELIX 180 668 185 COLOUR_TEXT_REGION 180 668 185 668 50 HELIX 244 668 244 COLOUR_TEXT_REGION 244 668 244 668 50 HELIX 246 668 247 COLOUR_TEXT_REGION 246 668 247 668 50 STRAND 22 669 27 COLOUR_TEXT_REGION 22 669 27 669 51 STRAND 39 669 39 COLOUR_TEXT_REGION 39 669 39 669 51 STRAND 59 669 65 COLOUR_TEXT_REGION 59 669 65 669 51 STRAND 82 669 87 COLOUR_TEXT_REGION 82 669 87 669 51 STRAND 107 669 112 COLOUR_TEXT_REGION 107 669 112 669 51 STRAND 199 669 201 COLOUR_TEXT_REGION 199 669 201 669 51 STRAND 216 669 221 COLOUR_TEXT_REGION 216 669 221 669 51 STRAND 229 669 231 COLOUR_TEXT_REGION 229 669 231 669 51 STRAND 236 669 241 COLOUR_TEXT_REGION 236 669 241 669 51 STRAND 253 669 258 COLOUR_TEXT_REGION 253 669 258 669 51 HELIX 5 669 18 COLOUR_TEXT_REGION 5 669 18 669 50 HELIX 180 669 187 COLOUR_TEXT_REGION 180 669 187 669 50 HELIX 243 669 247 COLOUR_TEXT_REGION 243 669 247 669 50