SILENT_MODE BLOCK_FILE jp_ekSRXLT.concise.blc MAX_NSEQ 344 MAX_INPUT_LEN 346 OUTPUT_FILE jp_ekSRXLT.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 146 333 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 334 146 343 H SPACE SUB_CHARS 1 334 146 343 E SPACE SUB_CHARS 1 334 146 343 - SPACE STRAND 67 337 73 COLOUR_TEXT_REGION 67 337 73 337 51 STRAND 97 337 99 COLOUR_TEXT_REGION 97 337 99 337 51 HELIX 5 337 19 COLOUR_TEXT_REGION 5 337 19 337 50 HELIX 29 337 42 COLOUR_TEXT_REGION 29 337 42 337 50 HELIX 51 337 63 COLOUR_TEXT_REGION 51 337 63 337 50 HELIX 82 337 90 COLOUR_TEXT_REGION 82 337 90 337 50 HELIX 116 337 130 COLOUR_TEXT_REGION 116 337 130 337 50 STRAND 67 342 72 COLOUR_TEXT_REGION 67 342 72 342 51 STRAND 97 342 100 COLOUR_TEXT_REGION 97 342 100 342 51 HELIX 5 342 19 COLOUR_TEXT_REGION 5 342 19 342 50 HELIX 29 342 42 COLOUR_TEXT_REGION 29 342 42 342 50 HELIX 51 342 63 COLOUR_TEXT_REGION 51 342 63 342 50 HELIX 83 342 90 COLOUR_TEXT_REGION 83 342 90 342 50 HELIX 116 342 132 COLOUR_TEXT_REGION 116 342 132 342 50 STRAND 67 343 74 COLOUR_TEXT_REGION 67 343 74 343 51 HELIX 4 343 18 COLOUR_TEXT_REGION 4 343 18 343 50 HELIX 29 343 42 COLOUR_TEXT_REGION 29 343 42 343 50 HELIX 52 343 63 COLOUR_TEXT_REGION 52 343 63 343 50 HELIX 81 343 90 COLOUR_TEXT_REGION 81 343 90 343 50 HELIX 115 343 130 COLOUR_TEXT_REGION 115 343 130 343 50