QUERY : PDWRQFCELHAQAAAVDFAHKFCRFLRDNPAYDTPDAGASFSRHFAANFLDVFGEEVRRVLVA : QUERY
UniRef90_UPI00042C2D7B : PGWRDFCEAHARAAALDFARRFRAFLSENPQFAAPGAEAAFSRRFAEHFVEHFEAEVSRACAG : UniRef90_UPI00042C2D7B
UniRef90_UPI0004624BF6 : PDWREFCEVHAQAAAVDFAQKFCQFVKENPHYDTPGAEASFSHHFAANFLDVFGLEVNRAFAS : UniRef90_UPI0004624BF6
UniRef90_H3BDE6 : PDWKEFCELHAQAAAVDFAQKFRQFLRENPHYNAPGAETSFSQHFADHFLDFFTSEVSRSYIS : UniRef90_H3BDE6
UniRef90_H3AF52 : PSWKEFCEIHAHAAAVEFARRFRTFLSENPQYAGPGAEATFSKRFAEHFMEQFEVEVNRTYVT : UniRef90_H3AF52
UniRef90_F7I7H3 : -DWRQFCELHAQAAAVDFAHKFCRFLRDNPAYDTPDAGASFSRHFAANFLDVFSEE------- : UniRef90_F7I7H3
UniRef90_UPI000443B89F : --WREFCESHARAAALDFAHRFRLYLASHPQYAHPQYEVAFSRRFAELFLKHFEAEVARASGS : UniRef90_UPI000443B89F
UniRef90_W5UF27 : PDWKEFCELHARASASDFAHKFRQFVTENPCYDAPGADASFSRHFARHFLDCFAAALNRA--- : UniRef90_W5UF27
UniRef90_E7FFS4 : PDWKEFCELHARASAADFAYKFRRFITENPCYDSPGADVSFSQHFAQHFLTCFSAALDQ---- : UniRef90_E7FFS4
UniRef90_UPI000329AD1A : -GWTEFCELHAIAAAQELARHYRSFARERPHHDVLPPET-FSKQFTDLFQQHFCCEVDK---- : UniRef90_UPI000329AD1A
UniRef90_UPI0004576208 : -GWKEFCELHAHTTAKELAKQYWLFANENPHYDLLGAET-FSLQFTDLFQQYFRNEVKEGFA- : UniRef90_UPI0004576208
UniRef90_A2RUZ0 : -SWTEFCELHARVAAGDFARHFRAFLQENPNYS-PDSAALFCRRFTDRFVRHFESEL------ : UniRef90_A2RUZ0
UniRef90_L7M845 : PHWSDFCEKHARVAAAEFAHNYQLFVADHQELARSAEFPAFGRRFAEVFQEHFEAEVRR---- : UniRef90_L7M845
UniRef90_UPI0003D0A12D : -GWRDFCEAHARAAAMDFARRFRAFVAENPRFAAPGAEAAFSRRYAQSFLEHFQAELRGAEA- : UniRef90_UPI0003D0A12D
UniRef90_H2RA95 : --WREFCESHARAAALDFARRFRLYLASHPQYAGPGAEAAFSRRYVELFLQ------------ : UniRef90_H2RA95
UniRef90_UPI0003EDDD98 : -GWSEFCELHAVAAARELARQYWVFAREHPHHA-PLRAELVSLQFTDLFQRYFCREVREGWSS : UniRef90_UPI0003EDDD98
UniRef90_G3W1L1 : -GWSEFCELHAVATAKELAKQYWLFASEHPHHDLLGAD-HFSLQFTDLFQQYFRHEVREGWA- : UniRef90_G3W1L1
UniRef90_A0A034WJ38 : -SWEEFCERHSRVAAADFAKACINYINGNPEEARNISYRSFGQKFAEAFVDHFETEF------ : UniRef90_A0A034WJ38
UniRef90_H0Z7W7 : -GWHEFCELHAISTAKELARHYLRFATEHPHHDLLAAEN-FSVQFTDLFQQYFCHELR----- : UniRef90_H0Z7W7
UniRef90_B4GEJ4 : -SWEEFCERHARAAASDFAKACITYINGNPEEARNIQHRSFSQKFVESFAVHYDTEFFR---- : UniRef90_B4GEJ4
UniRef90_UPI00034F38C0 : --WSEFCELHAVAAARELARQYWAFARQHPQHAPPRAE-LVSLRFADLFQHYFCLELRDARAG : UniRef90_UPI00034F38C0
UniRef90_Q17DJ2 : --WAEFCERHARAASADFARSCVHYITTNPESARTVSHRDFMRRFVDCFQEHFGHDFDR---- : UniRef90_Q17DJ2
UniRef90_Q7QFS7 : --WSEFCERHARAASADFARACVNYVTNNPEVARTISHRDFMRRFVQCFESRFEDEFQRRRA- : UniRef90_Q7QFS7
UniRef90_UPI0003EAB4DF : -GWKEFCELHAIATAKELAQQYRRFARERGQHDV-VAADSFSRQFAELFQQYFRHEV------ : UniRef90_UPI0003EAB4DF
UniRef90_H9G672 : -GWNEFCEQHAITTARELARKYLLFVNENPQHEVLAADN-FSLHFADLFQQYFRNELK----- : UniRef90_H9G672
UniRef90_B7PEL7 : PHWPDFCEKHARVAAAEFAQNYQHFVADHRDTAKAVDFLEFGRRFADVFLEHYEAEVKR---- : UniRef90_B7PEL7
UniRef90_A4QN29 : -GWNEFCKLHAISTARELAKQYWLFANQNPQHDILAAE-IFSLHFTDLFQQYFRNEVRES--- : UniRef90_A4QN29
UniRef90_A0A022T651 : -DWVEFCDRHARAAASDFAKAFCTYVSLNLPESTTLSHRDFLRKFVETFCEHFEHEYLRRSA- : UniRef90_A0A022T651
UniRef90_UPI00029D82BB : -DWRQFCELHAQAAAVDFAHKFCRFLRDNPAYDTWQKCRLLLRRAVA--GERFRLEFF----- : UniRef90_UPI00029D82BB
UniRef90_F6P9Y8 : -GWREFCELHASTTARELAQHYRRFVRERPVQDVVPPE-SFSKQFSALFQHHFSCEVAK---- : UniRef90_F6P9Y8
UniRef90_A0A026W9U4 : -GWSEFCERHARASASEFAKAFCAYVSLTPESARTLSHRDFLKKFVDSFCEHFENEYLR---- : UniRef90_A0A026W9U4
UniRef90_T1HN36 : -NWVEFCEKHARAAASNFAKSFICYVNSHNPNSSTLEHREFLSKFIDSFVEHFESELLK---- : UniRef90_T1HN36
UniRef90_UPI000440FFD7 : -DWKEFCELHASVTARQLALHYRHFARARPPHDVFPPE-SFSQQFSTLFQQHFCSEVAK---- : UniRef90_UPI000440FFD7
UniRef90_W5Q9J8 : -GWSEFCELHAVAAARELARQYWLFAREHPHHA-PLRAELVSLQFTDLFQRPYIIRSSRA--- : UniRef90_W5Q9J8
UniRef90_E5SE34 : --WTEFCESCAKFAAYDFAQSWRNYLTLNPQMIDRVSEQEAAAKFVQAFGSYFENEARRI--- : UniRef90_E5SE34
UniRef90_W4Y7H4 : -GWTEFCETEAHKAAVIFARNYRQYMANHPQVSEPMPPTRFAQRFTEHFFEHFEAEARRGF-- : UniRef90_W4Y7H4
UniRef90_W5PYS4 : -DWRQFCELHAQAAAVDFAHKFCRFLRDNPAYDAPPSGRSVA--------------------- : UniRef90_W5PYS4
UniRef90_T2M5B9 : --WEEFCEEAANYAAVEFARKSVSFVSLNPIYNNGAFFNKAPRKFIDTFYVKFEEELQRI--- : UniRef90_T2M5B9
UniRef90_D6RCY9 : -GWSDFCEQHAAAAARELARQYWLFARAHPQ---PPRADLVSLQFAELFQRHFCREVRESLAG : UniRef90_D6RCY9
UniRef90_G1TLV4 : -GWSDFCELHAVAAARELARQYWRFPPQTPQHAPAAPPSSFRLQFTDLFQRYFCRNGAR---- : UniRef90_G1TLV4
UniRef90_B4K575 : ---EEFCDRHARVAASDFAKACINYINSNPDVARGISHRNFSIKFVEFFTVHYAAEFSK---- : UniRef90_B4K575
UniRef90_UPI000359512B : ----DFCEKQASNSAQNFVHNFLAFDRNNPAIGRTRDPYDYAKKFTEFFLRYFDYELRRSS-- : UniRef90_UPI000359512B
UniRef90_UPI0004438A70 : PDWHHFCELQARAAAADFAPRFCRFLRDHPALDTPDAGAAFSRHFAASFLEAFAEEVRRVLAG : UniRef90_UPI0004438A70
UniRef90_G9KNK3 : -------------AAVDFAHKFCRFLRDNPAYDTPDAGASFSRHFAANFLDVFGEEVRRVLVA : UniRef90_G9KNK3
UniRef90_H2T7P0 : PDWREFCELHARASAADFADKFQRFLSENPCYDFPGA-------------------------- : UniRef90_H2T7P0
UniRef90_U5EMT1 : --WTEFVERHAKATSSDFAKSCVHYITNNPENARTVSHRDFMRRFIECFELNFENDFYR---- : UniRef90_U5EMT1
UniRef90_T1PH02 : -SWDEFSERHARVAAADFAKACICFINGGPDEARNLTYRNFGQKFLESFAEHYEKEFLR---- : UniRef90_T1PH02
UniRef90_UPI000457328F : PGWQQFCELHARAAAAQFARSFRLFVSENPRYESVGAETSFCQHFVAHFLRSFAVEIS----- : UniRef90_UPI000457328F
UniRef90_UPI0003F0E70E : -DWAELCEHHAQAAAAEFARHFRQFLTDNPEFDEPDAGNKFARRYVDHFLDHFEVEAHKGFNA : UniRef90_UPI0003F0E70E
UniRef90_K1QJT1 : -GWCEFCDNQAITASEQFVRSFLDFQRS--QYSVPRDPVMYAKKFVEYFLQHFERQIKRTS-- : UniRef90_K1QJT1
UniRef90_D2A4V7 : -SWIEFCERHASVAAQDFSKSCVQFMSLNLSESATITHKDFLGKFLETFAEHFETDFRKAQVA : UniRef90_D2A4V7
UniRef90_G1SIG7 : --WSDFCELHAVAAARELARQYWRFPPQAPRSTRPLRPRA---RFGWLFQRYFCRDYR----- : UniRef90_G1SIG7
UniRef90_N6UPH5 : --WIEFCERHAVAAAQDFSKSCHNYINMCLPESTRVNHKDLMKKFIELFSEEFDRDFNR---- : UniRef90_N6UPH5
UniRef90_G6D5M7 : -GWVEMCERQAKTSAQDFAKACLQYINSNEAAARPLSQKELLKKFVECFSEQFDFEF------ : UniRef90_G6D5M7
UniRef90_T1IQ70 : PSWVDICNRHAHRAAAQLAAELRIFIADRPSSATSGSE-DFSKKFCDSFSDYFEAELKR---- : UniRef90_T1IQ70
UniRef90_K7IZC7 : PNWAEFCERHARAAAADFAKAFCTYVNLDLTESARASYRDFLRKFVETFCDHFEAEYVR---- : UniRef90_K7IZC7
UniRef90_H9JUP9 : -GWVEYCEREARAAAQELAKGCLPYI-QPGHEAAAQPHKDLLKKFIDCFTEHFDIEI------ : UniRef90_H9JUP9
UniRef90_E0VIR8 : --WADFCDVQAKTVATDLANAFCKYLANNLQ---TLSHKEFISKFMDFFIVHFESEIAK---- : UniRef90_E0VIR8
UniRef90_UPI000329210F : -------------------------------YAGPGAEAAFSHCFAELFLQHFEAEVARASGS : UniRef90_UPI000329210F
: 1---------11--------21--------31--------41--------51--------61- :
OrigSeq : PDWRQFCELHAQAAAVDFAHKFCRFLRDNPAYDTPDAGASFSRHFAANFLDVFGEEVRRVLVA : OrigSeq
Jnet : ---HHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHH-- : Jnet
jhmm : ---HHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHH-- : jhmm
jpssm : ---HHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHH-- : jpssm
Lupas 14 : --------------------------------------------------------------- : Lupas 14
Lupas 21 : --------------------------------------------------------------- : Lupas 21
Lupas 28 : --------------------------------------------------------------- : Lupas 28
Jnet_25 : --B--BB--BB--BB--BB--BB-BB-----------B--BB--BB-BBB-BB---B------ : Jnet_25
Jnet_5 : ------B---B---B--BB--B--BB--------------BB--BB--B---B---B------ : Jnet_5
Jnet_0 : ------B---B---B---B-----------------------------B-------------- : Jnet_0
Jnet Rel : 997389999999999999999999985167887752079999999999999999999987289 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.