SILENT_MODE BLOCK_FILE jp_bWOPbBK.concise.blc MAX_NSEQ 894 MAX_INPUT_LEN 896 OUTPUT_FILE jp_bWOPbBK.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 160 883 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 884 160 893 H SPACE SUB_CHARS 1 884 160 893 E SPACE SUB_CHARS 1 884 160 893 - SPACE STRAND 22 887 27 COLOUR_TEXT_REGION 22 887 27 887 51 STRAND 69 887 69 COLOUR_TEXT_REGION 69 887 69 887 51 STRAND 88 887 93 COLOUR_TEXT_REGION 88 887 93 887 51 STRAND 113 887 118 COLOUR_TEXT_REGION 113 887 118 887 51 STRAND 132 887 134 COLOUR_TEXT_REGION 132 887 134 887 51 HELIX 6 887 18 COLOUR_TEXT_REGION 6 887 18 887 50 HELIX 35 887 46 COLOUR_TEXT_REGION 35 887 46 887 50 HELIX 77 887 83 COLOUR_TEXT_REGION 77 887 83 887 50 HELIX 137 887 148 COLOUR_TEXT_REGION 137 887 148 887 50 STRAND 22 892 27 COLOUR_TEXT_REGION 22 892 27 892 51 STRAND 50 892 51 COLOUR_TEXT_REGION 50 892 51 892 51 STRAND 69 892 70 COLOUR_TEXT_REGION 69 892 70 892 51 STRAND 88 892 93 COLOUR_TEXT_REGION 88 892 93 892 51 STRAND 113 892 118 COLOUR_TEXT_REGION 113 892 118 892 51 STRAND 132 892 135 COLOUR_TEXT_REGION 132 892 135 892 51 HELIX 6 892 18 COLOUR_TEXT_REGION 6 892 18 892 50 HELIX 35 892 45 COLOUR_TEXT_REGION 35 892 45 892 50 HELIX 77 892 84 COLOUR_TEXT_REGION 77 892 84 892 50 HELIX 137 892 148 COLOUR_TEXT_REGION 137 892 148 892 50 STRAND 23 893 26 COLOUR_TEXT_REGION 23 893 26 893 51 STRAND 88 893 92 COLOUR_TEXT_REGION 88 893 92 893 51 STRAND 113 893 117 COLOUR_TEXT_REGION 113 893 117 893 51 STRAND 133 893 134 COLOUR_TEXT_REGION 133 893 134 893 51 HELIX 6 893 18 COLOUR_TEXT_REGION 6 893 18 893 50 HELIX 35 893 46 COLOUR_TEXT_REGION 35 893 46 893 50 HELIX 77 893 83 COLOUR_TEXT_REGION 77 893 83 893 50 HELIX 137 893 147 COLOUR_TEXT_REGION 137 893 147 893 50