SILENT_MODE BLOCK_FILE jp_cqVYISo.concise.blc MAX_NSEQ 742 MAX_INPUT_LEN 744 OUTPUT_FILE jp_cqVYISo.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 180 731 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 732 180 741 H SPACE SUB_CHARS 1 732 180 741 E SPACE SUB_CHARS 1 732 180 741 - SPACE STRAND 18 735 22 COLOUR_TEXT_REGION 18 735 22 735 51 STRAND 39 735 43 COLOUR_TEXT_REGION 39 735 43 735 51 STRAND 64 735 68 COLOUR_TEXT_REGION 64 735 68 735 51 STRAND 91 735 95 COLOUR_TEXT_REGION 91 735 95 735 51 STRAND 124 735 127 COLOUR_TEXT_REGION 124 735 127 735 51 STRAND 153 735 157 COLOUR_TEXT_REGION 153 735 157 735 51 HELIX 3 735 13 COLOUR_TEXT_REGION 3 735 13 735 50 HELIX 27 735 35 COLOUR_TEXT_REGION 27 735 35 735 50 HELIX 49 735 59 COLOUR_TEXT_REGION 49 735 59 735 50 HELIX 74 735 86 COLOUR_TEXT_REGION 74 735 86 735 50 HELIX 115 735 118 COLOUR_TEXT_REGION 115 735 118 735 50 HELIX 131 735 146 COLOUR_TEXT_REGION 131 735 146 735 50 HELIX 159 735 163 COLOUR_TEXT_REGION 159 735 163 735 50 STRAND 18 740 22 COLOUR_TEXT_REGION 18 740 22 740 51 STRAND 40 740 43 COLOUR_TEXT_REGION 40 740 43 740 51 STRAND 64 740 69 COLOUR_TEXT_REGION 64 740 69 740 51 STRAND 91 740 95 COLOUR_TEXT_REGION 91 740 95 740 51 STRAND 123 740 127 COLOUR_TEXT_REGION 123 740 127 740 51 STRAND 153 740 157 COLOUR_TEXT_REGION 153 740 157 740 51 HELIX 3 740 13 COLOUR_TEXT_REGION 3 740 13 740 50 HELIX 27 740 34 COLOUR_TEXT_REGION 27 740 34 740 50 HELIX 49 740 59 COLOUR_TEXT_REGION 49 740 59 740 50 HELIX 73 740 86 COLOUR_TEXT_REGION 73 740 86 740 50 HELIX 114 740 122 COLOUR_TEXT_REGION 114 740 122 740 50 HELIX 131 740 146 COLOUR_TEXT_REGION 131 740 146 740 50 HELIX 159 740 163 COLOUR_TEXT_REGION 159 740 163 740 50 STRAND 18 741 22 COLOUR_TEXT_REGION 18 741 22 741 51 STRAND 39 741 43 COLOUR_TEXT_REGION 39 741 43 741 51 STRAND 64 741 67 COLOUR_TEXT_REGION 64 741 67 741 51 STRAND 92 741 96 COLOUR_TEXT_REGION 92 741 96 741 51 STRAND 152 741 157 COLOUR_TEXT_REGION 152 741 157 741 51 HELIX 3 741 13 COLOUR_TEXT_REGION 3 741 13 741 50 HELIX 27 741 35 COLOUR_TEXT_REGION 27 741 35 741 50 HELIX 50 741 60 COLOUR_TEXT_REGION 50 741 60 741 50 HELIX 86 741 86 COLOUR_TEXT_REGION 86 741 86 741 50 HELIX 124 741 129 COLOUR_TEXT_REGION 124 741 129 741 50 HELIX 135 741 146 COLOUR_TEXT_REGION 135 741 146 741 50 HELIX 159 741 162 COLOUR_TEXT_REGION 159 741 162 741 50