SILENT_MODE BLOCK_FILE jp_p26uiyC.concise.blc MAX_NSEQ 928 MAX_INPUT_LEN 930 OUTPUT_FILE jp_p26uiyC.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 287 917 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 918 287 927 H SPACE SUB_CHARS 1 918 287 927 E SPACE SUB_CHARS 1 918 287 927 - SPACE STRAND 4 921 9 COLOUR_TEXT_REGION 4 921 9 921 51 STRAND 33 921 39 COLOUR_TEXT_REGION 33 921 39 921 51 STRAND 82 921 85 COLOUR_TEXT_REGION 82 921 85 921 51 STRAND 126 921 131 COLOUR_TEXT_REGION 126 921 131 921 51 STRAND 212 921 216 COLOUR_TEXT_REGION 212 921 216 921 51 STRAND 237 921 238 COLOUR_TEXT_REGION 237 921 238 921 51 STRAND 260 921 265 COLOUR_TEXT_REGION 260 921 265 921 51 HELIX 14 921 28 COLOUR_TEXT_REGION 14 921 28 921 50 HELIX 59 921 76 COLOUR_TEXT_REGION 59 921 76 921 50 HELIX 108 921 121 COLOUR_TEXT_REGION 108 921 121 921 50 HELIX 141 921 155 COLOUR_TEXT_REGION 141 921 155 921 50 HELIX 175 921 185 COLOUR_TEXT_REGION 175 921 185 921 50 HELIX 220 921 234 COLOUR_TEXT_REGION 220 921 234 921 50 HELIX 249 921 254 COLOUR_TEXT_REGION 249 921 254 921 50 STRAND 4 926 9 COLOUR_TEXT_REGION 4 926 9 926 51 STRAND 33 926 39 COLOUR_TEXT_REGION 33 926 39 926 51 STRAND 83 926 84 COLOUR_TEXT_REGION 83 926 84 926 51 STRAND 126 926 130 COLOUR_TEXT_REGION 126 926 130 926 51 STRAND 213 926 216 COLOUR_TEXT_REGION 213 926 216 926 51 STRAND 236 926 238 COLOUR_TEXT_REGION 236 926 238 926 51 STRAND 260 926 265 COLOUR_TEXT_REGION 260 926 265 926 51 HELIX 14 926 28 COLOUR_TEXT_REGION 14 926 28 926 50 HELIX 59 926 76 COLOUR_TEXT_REGION 59 926 76 926 50 HELIX 108 926 121 COLOUR_TEXT_REGION 108 926 121 926 50 HELIX 141 926 155 COLOUR_TEXT_REGION 141 926 155 926 50 HELIX 177 926 183 COLOUR_TEXT_REGION 177 926 183 926 50 HELIX 220 926 234 COLOUR_TEXT_REGION 220 926 234 926 50 HELIX 249 926 255 COLOUR_TEXT_REGION 249 926 255 926 50 STRAND 4 927 9 COLOUR_TEXT_REGION 4 927 9 927 51 STRAND 32 927 38 COLOUR_TEXT_REGION 32 927 38 927 51 STRAND 82 927 85 COLOUR_TEXT_REGION 82 927 85 927 51 STRAND 126 927 131 COLOUR_TEXT_REGION 126 927 131 927 51 STRAND 211 927 216 COLOUR_TEXT_REGION 211 927 216 927 51 STRAND 245 927 246 COLOUR_TEXT_REGION 245 927 246 927 51 STRAND 259 927 264 COLOUR_TEXT_REGION 259 927 264 927 51 HELIX 15 927 28 COLOUR_TEXT_REGION 15 927 28 927 50 HELIX 60 927 77 COLOUR_TEXT_REGION 60 927 77 927 50 HELIX 108 927 121 COLOUR_TEXT_REGION 108 927 121 927 50 HELIX 141 927 155 COLOUR_TEXT_REGION 141 927 155 927 50 HELIX 175 927 186 COLOUR_TEXT_REGION 175 927 186 927 50 HELIX 220 927 233 COLOUR_TEXT_REGION 220 927 233 927 50 HELIX 250 927 254 COLOUR_TEXT_REGION 250 927 254 927 50