SILENT_MODE BLOCK_FILE jp_edue7Xt.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_edue7Xt.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 189 10 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 11 189 20 H SPACE SUB_CHARS 1 11 189 20 E SPACE SUB_CHARS 1 11 189 20 - SPACE STRAND 71 14 72 COLOUR_TEXT_REGION 71 14 72 14 51 STRAND 136 14 141 COLOUR_TEXT_REGION 136 14 141 14 51 STRAND 145 14 150 COLOUR_TEXT_REGION 145 14 150 14 51 STRAND 160 14 163 COLOUR_TEXT_REGION 160 14 163 14 51 HELIX 8 14 27 COLOUR_TEXT_REGION 8 14 27 14 50 HELIX 34 14 46 COLOUR_TEXT_REGION 34 14 46 14 50 HELIX 53 14 64 COLOUR_TEXT_REGION 53 14 64 14 50 HELIX 74 14 83 COLOUR_TEXT_REGION 74 14 83 14 50 HELIX 90 14 101 COLOUR_TEXT_REGION 90 14 101 14 50 HELIX 170 14 178 COLOUR_TEXT_REGION 170 14 178 14 50 HELIX 181 14 183 COLOUR_TEXT_REGION 181 14 183 14 50 STRAND 71 19 72 COLOUR_TEXT_REGION 71 19 72 19 51 STRAND 136 19 141 COLOUR_TEXT_REGION 136 19 141 19 51 STRAND 145 19 150 COLOUR_TEXT_REGION 145 19 150 19 51 STRAND 160 19 163 COLOUR_TEXT_REGION 160 19 163 19 51 HELIX 8 19 27 COLOUR_TEXT_REGION 8 19 27 19 50 HELIX 35 19 45 COLOUR_TEXT_REGION 35 19 45 19 50 HELIX 56 19 64 COLOUR_TEXT_REGION 56 19 64 19 50 HELIX 74 19 83 COLOUR_TEXT_REGION 74 19 83 19 50 HELIX 90 19 101 COLOUR_TEXT_REGION 90 19 101 19 50 HELIX 170 19 178 COLOUR_TEXT_REGION 170 19 178 19 50 HELIX 181 19 183 COLOUR_TEXT_REGION 181 19 183 19 50 STRAND 71 20 73 COLOUR_TEXT_REGION 71 20 73 20 51 STRAND 136 20 141 COLOUR_TEXT_REGION 136 20 141 20 51 STRAND 145 20 149 COLOUR_TEXT_REGION 145 20 149 20 51 STRAND 160 20 163 COLOUR_TEXT_REGION 160 20 163 20 51 HELIX 8 20 27 COLOUR_TEXT_REGION 8 20 27 20 50 HELIX 34 20 46 COLOUR_TEXT_REGION 34 20 46 20 50 HELIX 52 20 64 COLOUR_TEXT_REGION 52 20 64 20 50 HELIX 74 20 83 COLOUR_TEXT_REGION 74 20 83 20 50 HELIX 90 20 101 COLOUR_TEXT_REGION 90 20 101 20 50 HELIX 170 20 178 COLOUR_TEXT_REGION 170 20 178 20 50 HELIX 182 20 183 COLOUR_TEXT_REGION 182 20 183 20 50