SILENT_MODE BLOCK_FILE jp__2J5TsU.concise.blc MAX_NSEQ 350 MAX_INPUT_LEN 352 OUTPUT_FILE jp__2J5TsU.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 179 339 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 340 179 349 H SPACE SUB_CHARS 1 340 179 349 E SPACE SUB_CHARS 1 340 179 349 - SPACE STRAND 3 343 7 COLOUR_TEXT_REGION 3 343 7 343 51 STRAND 32 343 36 COLOUR_TEXT_REGION 32 343 36 343 51 STRAND 46 343 51 COLOUR_TEXT_REGION 46 343 51 343 51 STRAND 79 343 80 COLOUR_TEXT_REGION 79 343 80 343 51 STRAND 86 343 94 COLOUR_TEXT_REGION 86 343 94 343 51 STRAND 123 343 125 COLOUR_TEXT_REGION 123 343 125 343 51 STRAND 171 343 176 COLOUR_TEXT_REGION 171 343 176 343 51 HELIX 16 343 28 COLOUR_TEXT_REGION 16 343 28 343 50 HELIX 56 343 71 COLOUR_TEXT_REGION 56 343 71 343 50 HELIX 100 343 116 COLOUR_TEXT_REGION 100 343 116 343 50 HELIX 138 343 141 COLOUR_TEXT_REGION 138 343 141 343 50 STRAND 3 348 7 COLOUR_TEXT_REGION 3 348 7 348 51 STRAND 33 348 36 COLOUR_TEXT_REGION 33 348 36 348 51 STRAND 46 348 51 COLOUR_TEXT_REGION 46 348 51 348 51 STRAND 78 348 81 COLOUR_TEXT_REGION 78 348 81 348 51 STRAND 85 348 94 COLOUR_TEXT_REGION 85 348 94 348 51 STRAND 123 348 125 COLOUR_TEXT_REGION 123 348 125 348 51 STRAND 171 348 177 COLOUR_TEXT_REGION 171 348 177 348 51 HELIX 16 348 28 COLOUR_TEXT_REGION 16 348 28 348 50 HELIX 56 348 72 COLOUR_TEXT_REGION 56 348 72 348 50 HELIX 100 348 116 COLOUR_TEXT_REGION 100 348 116 348 50 HELIX 138 348 141 COLOUR_TEXT_REGION 138 348 141 348 50 HELIX 146 348 149 COLOUR_TEXT_REGION 146 348 149 348 50 STRAND 5 349 6 COLOUR_TEXT_REGION 5 349 6 349 51 STRAND 32 349 37 COLOUR_TEXT_REGION 32 349 37 349 51 STRAND 46 349 52 COLOUR_TEXT_REGION 46 349 52 349 51 STRAND 89 349 94 COLOUR_TEXT_REGION 89 349 94 349 51 STRAND 122 349 124 COLOUR_TEXT_REGION 122 349 124 349 51 STRAND 172 349 176 COLOUR_TEXT_REGION 172 349 176 349 51 HELIX 3 349 4 COLOUR_TEXT_REGION 3 349 4 349 50 HELIX 16 349 28 COLOUR_TEXT_REGION 16 349 28 349 50 HELIX 57 349 70 COLOUR_TEXT_REGION 57 349 70 349 50 HELIX 100 349 115 COLOUR_TEXT_REGION 100 349 115 349 50 HELIX 137 349 141 COLOUR_TEXT_REGION 137 349 141 349 50