SILENT_MODE BLOCK_FILE jp_jjgZLbD.concise.blc MAX_NSEQ 72 MAX_INPUT_LEN 74 OUTPUT_FILE jp_jjgZLbD.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 288 61 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 62 288 71 H SPACE SUB_CHARS 1 62 288 71 E SPACE SUB_CHARS 1 62 288 71 - SPACE STRAND 9 65 15 COLOUR_TEXT_REGION 9 65 15 65 51 STRAND 47 65 49 COLOUR_TEXT_REGION 47 65 49 65 51 STRAND 85 65 88 COLOUR_TEXT_REGION 85 65 88 65 51 STRAND 94 65 98 COLOUR_TEXT_REGION 94 65 98 65 51 STRAND 106 65 111 COLOUR_TEXT_REGION 106 65 111 65 51 STRAND 115 65 117 COLOUR_TEXT_REGION 115 65 117 65 51 STRAND 121 65 124 COLOUR_TEXT_REGION 121 65 124 65 51 STRAND 130 65 132 COLOUR_TEXT_REGION 130 65 132 65 51 STRAND 137 65 140 COLOUR_TEXT_REGION 137 65 140 65 51 STRAND 145 65 151 COLOUR_TEXT_REGION 145 65 151 65 51 STRAND 157 65 165 COLOUR_TEXT_REGION 157 65 165 65 51 STRAND 177 65 182 COLOUR_TEXT_REGION 177 65 182 65 51 STRAND 187 65 192 COLOUR_TEXT_REGION 187 65 192 65 51 STRAND 200 65 207 COLOUR_TEXT_REGION 200 65 207 65 51 STRAND 223 65 223 COLOUR_TEXT_REGION 223 65 223 65 51 STRAND 230 65 232 COLOUR_TEXT_REGION 230 65 232 65 51 STRAND 236 65 240 COLOUR_TEXT_REGION 236 65 240 65 51 STRAND 249 65 256 COLOUR_TEXT_REGION 249 65 256 65 51 STRAND 260 65 267 COLOUR_TEXT_REGION 260 65 267 65 51 STRAND 272 65 282 COLOUR_TEXT_REGION 272 65 282 65 51 HELIX 23 65 42 COLOUR_TEXT_REGION 23 65 42 65 50 HELIX 46 65 46 COLOUR_TEXT_REGION 46 65 46 65 50 HELIX 212 65 222 COLOUR_TEXT_REGION 212 65 222 65 50 STRAND 8 70 15 COLOUR_TEXT_REGION 8 70 15 70 51 STRAND 46 70 50 COLOUR_TEXT_REGION 46 70 50 70 51 STRAND 85 70 88 COLOUR_TEXT_REGION 85 70 88 70 51 STRAND 94 70 98 COLOUR_TEXT_REGION 94 70 98 70 51 STRAND 106 70 111 COLOUR_TEXT_REGION 106 70 111 70 51 STRAND 115 70 116 COLOUR_TEXT_REGION 115 70 116 70 51 STRAND 121 70 124 COLOUR_TEXT_REGION 121 70 124 70 51 STRAND 130 70 132 COLOUR_TEXT_REGION 130 70 132 70 51 STRAND 137 70 140 COLOUR_TEXT_REGION 137 70 140 70 51 STRAND 145 70 151 COLOUR_TEXT_REGION 145 70 151 70 51 STRAND 157 70 167 COLOUR_TEXT_REGION 157 70 167 70 51 STRAND 176 70 181 COLOUR_TEXT_REGION 176 70 181 70 51 STRAND 187 70 191 COLOUR_TEXT_REGION 187 70 191 70 51 STRAND 200 70 207 COLOUR_TEXT_REGION 200 70 207 70 51 STRAND 223 70 223 COLOUR_TEXT_REGION 223 70 223 70 51 STRAND 230 70 234 COLOUR_TEXT_REGION 230 70 234 70 51 STRAND 236 70 240 COLOUR_TEXT_REGION 236 70 240 70 51 STRAND 249 70 256 COLOUR_TEXT_REGION 249 70 256 70 51 STRAND 260 70 267 COLOUR_TEXT_REGION 260 70 267 70 51 STRAND 272 70 280 COLOUR_TEXT_REGION 272 70 280 70 51 HELIX 23 70 42 COLOUR_TEXT_REGION 23 70 42 70 50 HELIX 45 70 45 COLOUR_TEXT_REGION 45 70 45 70 50 HELIX 212 70 222 COLOUR_TEXT_REGION 212 70 222 70 50 STRAND 13 71 15 COLOUR_TEXT_REGION 13 71 15 71 51 STRAND 85 71 88 COLOUR_TEXT_REGION 85 71 88 71 51 STRAND 95 71 98 COLOUR_TEXT_REGION 95 71 98 71 51 STRAND 105 71 110 COLOUR_TEXT_REGION 105 71 110 71 51 STRAND 114 71 117 COLOUR_TEXT_REGION 114 71 117 71 51 STRAND 122 71 125 COLOUR_TEXT_REGION 122 71 125 71 51 STRAND 129 71 131 COLOUR_TEXT_REGION 129 71 131 71 51 STRAND 137 71 140 COLOUR_TEXT_REGION 137 71 140 71 51 STRAND 144 71 152 COLOUR_TEXT_REGION 144 71 152 71 51 STRAND 158 71 164 COLOUR_TEXT_REGION 158 71 164 71 51 STRAND 177 71 182 COLOUR_TEXT_REGION 177 71 182 71 51 STRAND 188 71 193 COLOUR_TEXT_REGION 188 71 193 71 51 STRAND 199 71 207 COLOUR_TEXT_REGION 199 71 207 71 51 STRAND 222 71 224 COLOUR_TEXT_REGION 222 71 224 71 51 STRAND 236 71 240 COLOUR_TEXT_REGION 236 71 240 71 51 STRAND 249 71 256 COLOUR_TEXT_REGION 249 71 256 71 51 STRAND 260 71 266 COLOUR_TEXT_REGION 260 71 266 71 51 STRAND 272 71 285 COLOUR_TEXT_REGION 272 71 285 71 51 HELIX 23 71 42 COLOUR_TEXT_REGION 23 71 42 71 50 HELIX 46 71 51 COLOUR_TEXT_REGION 46 71 51 71 50 HELIX 212 71 221 COLOUR_TEXT_REGION 212 71 221 71 50