SILENT_MODE BLOCK_FILE jp_jwTs2Gf.concise.blc MAX_NSEQ 1056 MAX_INPUT_LEN 1058 OUTPUT_FILE jp_jwTs2Gf.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 450 1045 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1046 450 1055 H SPACE SUB_CHARS 1 1046 450 1055 E SPACE SUB_CHARS 1 1046 450 1055 - SPACE HELIX 4 1049 18 COLOUR_TEXT_REGION 4 1049 18 1049 50 HELIX 22 1049 31 COLOUR_TEXT_REGION 22 1049 31 1049 50 HELIX 37 1049 48 COLOUR_TEXT_REGION 37 1049 48 1049 50 HELIX 55 1049 64 COLOUR_TEXT_REGION 55 1049 64 1049 50 HELIX 70 1049 84 COLOUR_TEXT_REGION 70 1049 84 1049 50 HELIX 88 1049 94 COLOUR_TEXT_REGION 88 1049 94 1049 50 HELIX 102 1049 113 COLOUR_TEXT_REGION 102 1049 113 1049 50 HELIX 118 1049 130 COLOUR_TEXT_REGION 118 1049 130 1049 50 HELIX 137 1049 148 COLOUR_TEXT_REGION 137 1049 148 1049 50 HELIX 154 1049 167 COLOUR_TEXT_REGION 154 1049 167 1049 50 HELIX 170 1049 179 COLOUR_TEXT_REGION 170 1049 179 1049 50 HELIX 184 1049 196 COLOUR_TEXT_REGION 184 1049 196 1049 50 HELIX 199 1049 206 COLOUR_TEXT_REGION 199 1049 206 1049 50 HELIX 215 1049 227 COLOUR_TEXT_REGION 215 1049 227 1049 50 HELIX 230 1049 242 COLOUR_TEXT_REGION 230 1049 242 1049 50 HELIX 248 1049 264 COLOUR_TEXT_REGION 248 1049 264 1049 50 HELIX 269 1049 278 COLOUR_TEXT_REGION 269 1049 278 1049 50 HELIX 285 1049 298 COLOUR_TEXT_REGION 285 1049 298 1049 50 HELIX 301 1049 311 COLOUR_TEXT_REGION 301 1049 311 1049 50 HELIX 313 1049 318 COLOUR_TEXT_REGION 313 1049 318 1049 50 HELIX 320 1049 332 COLOUR_TEXT_REGION 320 1049 332 1049 50 HELIX 335 1049 346 COLOUR_TEXT_REGION 335 1049 346 1049 50 HELIX 353 1049 360 COLOUR_TEXT_REGION 353 1049 360 1049 50 HELIX 374 1049 380 COLOUR_TEXT_REGION 374 1049 380 1049 50 HELIX 384 1049 394 COLOUR_TEXT_REGION 384 1049 394 1049 50 HELIX 398 1049 409 COLOUR_TEXT_REGION 398 1049 409 1049 50 HELIX 413 1049 425 COLOUR_TEXT_REGION 413 1049 425 1049 50 HELIX 430 1049 439 COLOUR_TEXT_REGION 430 1049 439 1049 50 HELIX 4 1054 19 COLOUR_TEXT_REGION 4 1054 19 1054 50 HELIX 22 1054 31 COLOUR_TEXT_REGION 22 1054 31 1054 50 HELIX 37 1054 49 COLOUR_TEXT_REGION 37 1054 49 1054 50 HELIX 55 1054 64 COLOUR_TEXT_REGION 55 1054 64 1054 50 HELIX 70 1054 84 COLOUR_TEXT_REGION 70 1054 84 1054 50 HELIX 88 1054 94 COLOUR_TEXT_REGION 88 1054 94 1054 50 HELIX 102 1054 114 COLOUR_TEXT_REGION 102 1054 114 1054 50 HELIX 118 1054 130 COLOUR_TEXT_REGION 118 1054 130 1054 50 HELIX 137 1054 148 COLOUR_TEXT_REGION 137 1054 148 1054 50 HELIX 154 1054 167 COLOUR_TEXT_REGION 154 1054 167 1054 50 HELIX 170 1054 179 COLOUR_TEXT_REGION 170 1054 179 1054 50 HELIX 184 1054 196 COLOUR_TEXT_REGION 184 1054 196 1054 50 HELIX 199 1054 207 COLOUR_TEXT_REGION 199 1054 207 1054 50 HELIX 215 1054 228 COLOUR_TEXT_REGION 215 1054 228 1054 50 HELIX 230 1054 243 COLOUR_TEXT_REGION 230 1054 243 1054 50 HELIX 248 1054 265 COLOUR_TEXT_REGION 248 1054 265 1054 50 HELIX 268 1054 278 COLOUR_TEXT_REGION 268 1054 278 1054 50 HELIX 285 1054 298 COLOUR_TEXT_REGION 285 1054 298 1054 50 HELIX 301 1054 311 COLOUR_TEXT_REGION 301 1054 311 1054 50 HELIX 313 1054 313 COLOUR_TEXT_REGION 313 1054 313 1054 50 HELIX 315 1054 332 COLOUR_TEXT_REGION 315 1054 332 1054 50 HELIX 335 1054 346 COLOUR_TEXT_REGION 335 1054 346 1054 50 HELIX 353 1054 360 COLOUR_TEXT_REGION 353 1054 360 1054 50 HELIX 374 1054 379 COLOUR_TEXT_REGION 374 1054 379 1054 50 HELIX 384 1054 394 COLOUR_TEXT_REGION 384 1054 394 1054 50 HELIX 397 1054 409 COLOUR_TEXT_REGION 397 1054 409 1054 50 HELIX 413 1054 425 COLOUR_TEXT_REGION 413 1054 425 1054 50 HELIX 430 1054 438 COLOUR_TEXT_REGION 430 1054 438 1054 50 HELIX 3 1055 18 COLOUR_TEXT_REGION 3 1055 18 1055 50 HELIX 22 1055 31 COLOUR_TEXT_REGION 22 1055 31 1055 50 HELIX 38 1055 48 COLOUR_TEXT_REGION 38 1055 48 1055 50 HELIX 55 1055 64 COLOUR_TEXT_REGION 55 1055 64 1055 50 HELIX 70 1055 84 COLOUR_TEXT_REGION 70 1055 84 1055 50 HELIX 88 1055 94 COLOUR_TEXT_REGION 88 1055 94 1055 50 HELIX 102 1055 113 COLOUR_TEXT_REGION 102 1055 113 1055 50 HELIX 118 1055 130 COLOUR_TEXT_REGION 118 1055 130 1055 50 HELIX 138 1055 148 COLOUR_TEXT_REGION 138 1055 148 1055 50 HELIX 154 1055 166 COLOUR_TEXT_REGION 154 1055 166 1055 50 HELIX 170 1055 178 COLOUR_TEXT_REGION 170 1055 178 1055 50 HELIX 185 1055 195 COLOUR_TEXT_REGION 185 1055 195 1055 50 HELIX 199 1055 205 COLOUR_TEXT_REGION 199 1055 205 1055 50 HELIX 214 1055 226 COLOUR_TEXT_REGION 214 1055 226 1055 50 HELIX 230 1055 241 COLOUR_TEXT_REGION 230 1055 241 1055 50 HELIX 248 1055 264 COLOUR_TEXT_REGION 248 1055 264 1055 50 HELIX 269 1055 278 COLOUR_TEXT_REGION 269 1055 278 1055 50 HELIX 285 1055 298 COLOUR_TEXT_REGION 285 1055 298 1055 50 HELIX 302 1055 310 COLOUR_TEXT_REGION 302 1055 310 1055 50 HELIX 313 1055 315 COLOUR_TEXT_REGION 313 1055 315 1055 50 HELIX 320 1055 332 COLOUR_TEXT_REGION 320 1055 332 1055 50 HELIX 335 1055 346 COLOUR_TEXT_REGION 335 1055 346 1055 50 HELIX 353 1055 360 COLOUR_TEXT_REGION 353 1055 360 1055 50 HELIX 374 1055 380 COLOUR_TEXT_REGION 374 1055 380 1055 50 HELIX 384 1055 394 COLOUR_TEXT_REGION 384 1055 394 1055 50 HELIX 398 1055 409 COLOUR_TEXT_REGION 398 1055 409 1055 50 HELIX 413 1055 425 COLOUR_TEXT_REGION 413 1055 425 1055 50 HELIX 429 1055 439 COLOUR_TEXT_REGION 429 1055 439 1055 50