SILENT_MODE BLOCK_FILE jp_h96wz2T.concise.blc MAX_NSEQ 312 MAX_INPUT_LEN 314 OUTPUT_FILE jp_h96wz2T.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 251 301 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 302 251 311 H SPACE SUB_CHARS 1 302 251 311 E SPACE SUB_CHARS 1 302 251 311 - SPACE STRAND 16 305 19 COLOUR_TEXT_REGION 16 305 19 305 51 STRAND 101 305 104 COLOUR_TEXT_REGION 101 305 104 305 51 STRAND 130 305 135 COLOUR_TEXT_REGION 130 305 135 305 51 STRAND 164 305 169 COLOUR_TEXT_REGION 164 305 169 305 51 STRAND 177 305 179 COLOUR_TEXT_REGION 177 305 179 305 51 STRAND 204 305 205 COLOUR_TEXT_REGION 204 305 205 305 51 HELIX 25 305 36 COLOUR_TEXT_REGION 25 305 36 305 50 HELIX 38 305 44 COLOUR_TEXT_REGION 38 305 44 305 50 HELIX 54 305 66 COLOUR_TEXT_REGION 54 305 66 305 50 HELIX 76 305 82 COLOUR_TEXT_REGION 76 305 82 305 50 HELIX 87 305 96 COLOUR_TEXT_REGION 87 305 96 305 50 HELIX 113 305 125 COLOUR_TEXT_REGION 113 305 125 305 50 HELIX 147 305 159 COLOUR_TEXT_REGION 147 305 159 305 50 HELIX 186 305 195 COLOUR_TEXT_REGION 186 305 195 305 50 HELIX 209 305 219 COLOUR_TEXT_REGION 209 305 219 305 50 HELIX 233 305 241 COLOUR_TEXT_REGION 233 305 241 305 50 STRAND 16 310 19 COLOUR_TEXT_REGION 16 310 19 310 51 STRAND 101 310 104 COLOUR_TEXT_REGION 101 310 104 310 51 STRAND 130 310 135 COLOUR_TEXT_REGION 130 310 135 310 51 STRAND 164 310 169 COLOUR_TEXT_REGION 164 310 169 310 51 STRAND 177 310 179 COLOUR_TEXT_REGION 177 310 179 310 51 HELIX 25 310 35 COLOUR_TEXT_REGION 25 310 35 310 50 HELIX 38 310 44 COLOUR_TEXT_REGION 38 310 44 310 50 HELIX 54 310 66 COLOUR_TEXT_REGION 54 310 66 310 50 HELIX 76 310 83 COLOUR_TEXT_REGION 76 310 83 310 50 HELIX 87 310 96 COLOUR_TEXT_REGION 87 310 96 310 50 HELIX 113 310 125 COLOUR_TEXT_REGION 113 310 125 310 50 HELIX 147 310 159 COLOUR_TEXT_REGION 147 310 159 310 50 HELIX 187 310 195 COLOUR_TEXT_REGION 187 310 195 310 50 HELIX 210 310 219 COLOUR_TEXT_REGION 210 310 219 310 50 HELIX 233 310 241 COLOUR_TEXT_REGION 233 310 241 310 50 HELIX 245 310 247 COLOUR_TEXT_REGION 245 310 247 310 50 STRAND 16 311 19 COLOUR_TEXT_REGION 16 311 19 311 51 STRAND 43 311 44 COLOUR_TEXT_REGION 43 311 44 311 51 STRAND 101 311 104 COLOUR_TEXT_REGION 101 311 104 311 51 STRAND 130 311 135 COLOUR_TEXT_REGION 130 311 135 311 51 STRAND 164 311 168 COLOUR_TEXT_REGION 164 311 168 311 51 STRAND 203 311 205 COLOUR_TEXT_REGION 203 311 205 311 51 HELIX 25 311 38 COLOUR_TEXT_REGION 25 311 38 311 50 HELIX 41 311 42 COLOUR_TEXT_REGION 41 311 42 311 50 HELIX 54 311 66 COLOUR_TEXT_REGION 54 311 66 311 50 HELIX 76 311 82 COLOUR_TEXT_REGION 76 311 82 311 50 HELIX 87 311 97 COLOUR_TEXT_REGION 87 311 97 311 50 HELIX 113 311 125 COLOUR_TEXT_REGION 113 311 125 311 50 HELIX 147 311 159 COLOUR_TEXT_REGION 147 311 159 311 50 HELIX 185 311 195 COLOUR_TEXT_REGION 185 311 195 311 50 HELIX 209 311 219 COLOUR_TEXT_REGION 209 311 219 311 50 HELIX 233 311 241 COLOUR_TEXT_REGION 233 311 241 311 50