SILENT_MODE
BLOCK_FILE jp_kx6RDog.concise.blc
MAX_NSEQ 297
MAX_INPUT_LEN 299
OUTPUT_FILE jp_kx6RDog.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 194 286   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 287 194 296 H SPACE
SUB_CHARS 1 287 194 296 E SPACE
SUB_CHARS 1 287 194 296 - SPACE
HELIX 7 290 34
COLOUR_TEXT_REGION 7 290 34 290 50
HELIX 46 290 79
COLOUR_TEXT_REGION 46 290 79 290 50
HELIX 95 290 122
COLOUR_TEXT_REGION 95 290 122 290 50
HELIX 128 290 150
COLOUR_TEXT_REGION 128 290 150 290 50
HELIX 158 290 187
COLOUR_TEXT_REGION 158 290 187 290 50
HELIX 7 295 35
COLOUR_TEXT_REGION 7 295 35 295 50
HELIX 47 295 79
COLOUR_TEXT_REGION 47 295 79 295 50
HELIX 95 295 122
COLOUR_TEXT_REGION 95 295 122 295 50
HELIX 128 295 150
COLOUR_TEXT_REGION 128 295 150 295 50
HELIX 158 295 184
COLOUR_TEXT_REGION 158 295 184 295 50
HELIX 7 296 32
COLOUR_TEXT_REGION 7 296 32 296 50
HELIX 45 296 79
COLOUR_TEXT_REGION 45 296 79 296 50
HELIX 98 296 101
COLOUR_TEXT_REGION 98 296 101 296 50
HELIX 111 296 122
COLOUR_TEXT_REGION 111 296 122 296 50
HELIX 128 296 150
COLOUR_TEXT_REGION 128 296 150 296 50
HELIX 158 296 188
COLOUR_TEXT_REGION 158 296 188 296 50