SILENT_MODE BLOCK_FILE jp_m5hXW6O.concise.blc MAX_NSEQ 880 MAX_INPUT_LEN 882 OUTPUT_FILE jp_m5hXW6O.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 185 869 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 870 185 879 H SPACE SUB_CHARS 1 870 185 879 E SPACE SUB_CHARS 1 870 185 879 - SPACE STRAND 11 873 13 COLOUR_TEXT_REGION 11 873 13 873 51 STRAND 23 873 28 COLOUR_TEXT_REGION 23 873 28 873 51 STRAND 64 873 69 COLOUR_TEXT_REGION 64 873 69 873 51 STRAND 103 873 107 COLOUR_TEXT_REGION 103 873 107 873 51 STRAND 132 873 134 COLOUR_TEXT_REGION 132 873 134 873 51 HELIX 2 873 7 COLOUR_TEXT_REGION 2 873 7 873 50 HELIX 39 873 56 COLOUR_TEXT_REGION 39 873 56 873 50 HELIX 83 873 101 COLOUR_TEXT_REGION 83 873 101 873 50 HELIX 112 873 121 COLOUR_TEXT_REGION 112 873 121 873 50 HELIX 139 873 146 COLOUR_TEXT_REGION 139 873 146 873 50 HELIX 162 873 182 COLOUR_TEXT_REGION 162 873 182 873 50 STRAND 11 878 13 COLOUR_TEXT_REGION 11 878 13 878 51 STRAND 23 878 28 COLOUR_TEXT_REGION 23 878 28 878 51 STRAND 64 878 69 COLOUR_TEXT_REGION 64 878 69 878 51 STRAND 103 878 107 COLOUR_TEXT_REGION 103 878 107 878 51 STRAND 131 878 135 COLOUR_TEXT_REGION 131 878 135 878 51 HELIX 2 878 8 COLOUR_TEXT_REGION 2 878 8 878 50 HELIX 39 878 56 COLOUR_TEXT_REGION 39 878 56 878 50 HELIX 83 878 101 COLOUR_TEXT_REGION 83 878 101 878 50 HELIX 111 878 121 COLOUR_TEXT_REGION 111 878 121 878 50 HELIX 126 878 130 COLOUR_TEXT_REGION 126 878 130 878 50 HELIX 139 878 146 COLOUR_TEXT_REGION 139 878 146 878 50 HELIX 162 878 183 COLOUR_TEXT_REGION 162 878 183 878 50 STRAND 11 879 13 COLOUR_TEXT_REGION 11 879 13 879 51 STRAND 23 879 28 COLOUR_TEXT_REGION 23 879 28 879 51 STRAND 64 879 70 COLOUR_TEXT_REGION 64 879 70 879 51 STRAND 103 879 107 COLOUR_TEXT_REGION 103 879 107 879 51 STRAND 133 879 134 COLOUR_TEXT_REGION 133 879 134 879 51 HELIX 2 879 7 COLOUR_TEXT_REGION 2 879 7 879 50 HELIX 39 879 55 COLOUR_TEXT_REGION 39 879 55 879 50 HELIX 82 879 102 COLOUR_TEXT_REGION 82 879 102 879 50 HELIX 114 879 121 COLOUR_TEXT_REGION 114 879 121 879 50 HELIX 140 879 147 COLOUR_TEXT_REGION 140 879 147 879 50 HELIX 162 879 182 COLOUR_TEXT_REGION 162 879 182 879 50