SILENT_MODE BLOCK_FILE jp_N7kI4Be.concise.blc MAX_NSEQ 876 MAX_INPUT_LEN 878 OUTPUT_FILE jp_N7kI4Be.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 114 865 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 866 114 875 H SPACE SUB_CHARS 1 866 114 875 E SPACE SUB_CHARS 1 866 114 875 - SPACE HELIX 2 869 10 COLOUR_TEXT_REGION 2 869 10 869 50 HELIX 16 869 28 COLOUR_TEXT_REGION 16 869 28 869 50 HELIX 33 869 40 COLOUR_TEXT_REGION 33 869 40 869 50 HELIX 44 869 53 COLOUR_TEXT_REGION 44 869 53 869 50 HELIX 58 869 65 COLOUR_TEXT_REGION 58 869 65 869 50 HELIX 71 869 80 COLOUR_TEXT_REGION 71 869 80 869 50 HELIX 83 869 83 COLOUR_TEXT_REGION 83 869 83 869 50 HELIX 86 869 97 COLOUR_TEXT_REGION 86 869 97 869 50 HELIX 101 869 112 COLOUR_TEXT_REGION 101 869 112 869 50 HELIX 2 874 10 COLOUR_TEXT_REGION 2 874 10 874 50 HELIX 16 874 28 COLOUR_TEXT_REGION 16 874 28 874 50 HELIX 33 874 40 COLOUR_TEXT_REGION 33 874 40 874 50 HELIX 44 874 54 COLOUR_TEXT_REGION 44 874 54 874 50 HELIX 58 874 65 COLOUR_TEXT_REGION 58 874 65 874 50 HELIX 71 874 78 COLOUR_TEXT_REGION 71 874 78 874 50 HELIX 86 874 97 COLOUR_TEXT_REGION 86 874 97 874 50 HELIX 101 874 112 COLOUR_TEXT_REGION 101 874 112 874 50 HELIX 3 875 11 COLOUR_TEXT_REGION 3 875 11 875 50 HELIX 16 875 29 COLOUR_TEXT_REGION 16 875 29 875 50 HELIX 33 875 40 COLOUR_TEXT_REGION 33 875 40 875 50 HELIX 44 875 53 COLOUR_TEXT_REGION 44 875 53 875 50 HELIX 58 875 66 COLOUR_TEXT_REGION 58 875 66 875 50 HELIX 71 875 83 COLOUR_TEXT_REGION 71 875 83 875 50 HELIX 86 875 96 COLOUR_TEXT_REGION 86 875 96 875 50 HELIX 102 875 112 COLOUR_TEXT_REGION 102 875 112 875 50