SILENT_MODE
BLOCK_FILE jp_8C4GvTi.concise.blc
MAX_NSEQ 66
MAX_INPUT_LEN 68
OUTPUT_FILE jp_8C4GvTi.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 103 55   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 56 103 65 H SPACE
SUB_CHARS 1 56 103 65 E SPACE
SUB_CHARS 1 56 103 65 - SPACE
STRAND 63 59 66
COLOUR_TEXT_REGION 63 59 66 59 51
STRAND 74 59 79
COLOUR_TEXT_REGION 74 59 79 59 51
STRAND 83 59 87
COLOUR_TEXT_REGION 83 59 87 59 51
HELIX 11 59 21
COLOUR_TEXT_REGION 11 59 21 59 50
HELIX 48 59 60
COLOUR_TEXT_REGION 48 59 60 59 50
HELIX 91 59 101
COLOUR_TEXT_REGION 91 59 101 59 50
STRAND 17 64 20
COLOUR_TEXT_REGION 17 64 20 64 51
STRAND 63 64 66
COLOUR_TEXT_REGION 63 64 66 64 51
STRAND 74 64 79
COLOUR_TEXT_REGION 74 64 79 64 51
STRAND 83 64 87
COLOUR_TEXT_REGION 83 64 87 64 51
HELIX 13 64 16
COLOUR_TEXT_REGION 13 64 16 64 50
HELIX 48 64 60
COLOUR_TEXT_REGION 48 64 60 64 50
HELIX 91 64 101
COLOUR_TEXT_REGION 91 64 101 64 50
STRAND 62 65 66
COLOUR_TEXT_REGION 62 65 66 65 51
STRAND 74 65 79
COLOUR_TEXT_REGION 74 65 79 65 51
STRAND 83 65 87
COLOUR_TEXT_REGION 83 65 87 65 51
HELIX 11 65 21
COLOUR_TEXT_REGION 11 65 21 65 50
HELIX 49 65 61
COLOUR_TEXT_REGION 49 65 61 65 50
HELIX 91 65 101
COLOUR_TEXT_REGION 91 65 101 65 50