QUERY : LYFQSNAMKPRDINKLIASKIFGYEIKDDNIIKDGRYRLGIPLYSQNIESAWQVVEKLEYDVKVTKTDLKPKYQVHVFVPGGVKMVFAETAPMAICKGALASV : QUERY
UniRef90_R8SX34 : -------MKPIDINKLIASQVLGYEVKADNIVKEGRYRTGIPSYSQKIEHAWQVVEKMRKDYDFTPESFSLKTKCYFQLDDIEVSAVCETASMAICKAALLAI : UniRef90_R8SX34
UniRef90_C3CUN6 : -------MKNREFHILIAEQVMGWKVPDGTDFFDTKDNLNVFKPTKNLQDAWLVIEKMRKDYHFTPEESSLKTKCYFQLGDIEVSAVCETVQMAICKSAILAI : UniRef90_C3CUN6
UniRef90_F5L9E5 : -------MNNRDLDRLVAEKVMGWRWSDGSCNRDGVPRF-LPHYSTDISAAWEVVEKLREEIAFDILPAADHYIVKIQSAHGTDYVTAETAPLAICKAALKV- : UniRef90_F5L9E5
UniRef90_U1Y9W8 : ----------RELDILVANKVFGWEYDEFLEMFYTKHELGPFKPSTNITDAWQVLEKMRYQLGLMPTSFG-KWVCRGYLPETAKIQVQAEAPLAICLAALEAV : UniRef90_U1Y9W8
UniRef90_A0A024QI17 : -------MDNRKIDQLVAEKVMGWKVFETTVIDDGEFLVEIEEFSERIEDAWNVVEKIEYDIHVKAGKLELIGQYHCNINGF--HVYDKSAPLAICKAALKTV : UniRef90_A0A024QI17
UniRef90_R8D864 : -------MESSEINNSIAEKVMGWHWFDENSN-WTLKQTWNP--SNDIRDAWQVVEKMRKDYDFTPESFSLKTKCYFQLDDIEVSAVCEIAPLAICKAALLVI : UniRef90_R8D864
UniRef90_A0A023CQC6 : -------MNLREIDRLVAEKVMGWEPEEIEVLYKREEPPHIPDYSTNVADAWKVVEKLRKELYVDIDTFAEHYDVRVVSPNEVGHSLSETAPLAICLAALKA- : UniRef90_A0A023CQC6
UniRef90_A0A024QH06 : -------MDNRKIDQLVAEKVMGWEVIETTVIDDGEFPVEIEEFSERIEHTWDVVEKLSEKCGVEVQELGAPPYCKIISGAGKWIEYSDTVPVVICKAALKTV : UniRef90_A0A024QH06
UniRef90_J8DH12 : -------MNEKPIDELVAEKVMGWKPPETSILKSGTVHPELPKFSTNIQDAWLVVEKFSEGLYFSI----VKWIDGGYVVEIEKDSLSKTAPMAICIAALKAV : UniRef90_J8DH12
UniRef90_J3ZTF8 : -------MNDKPIDELVAEKVMGWKPPETSILKSGMVHRELPKFSMNMEDAWLVVDKLQKSVEIFIEDRMTNVIITEHFPSGHYQGYEKAVPLAICKAALKAV : UniRef90_J3ZTF8
UniRef90_J3X4G2 : -------MNDKPIDELVAEKVMGWKPPETSILKSGAVHPQLPKFSTNIQDAWLVVEKFEEGIFFSIHKWDGGYVVKIESLQVKDMAEAQTAPMAICLAALKVV : UniRef90_J3X4G2
UniRef90_UPI0003FF7005 : -------MSPRERDALVAEKVMGY----TECGKE-----EPIEYTTHISAAWDVVDRMQQLGWNMVPEIGRQWGCDLRDGRNLVVGLGPTAPEAICLAALRAV : UniRef90_UPI0003FF7005
UniRef90_T0D8A1 : -------MTFEEKHHLLAEKVMEWEYEEPVYFRDGTFLCECEWYTEDISAAWEVVEKMKQDGWLPSIEYFEKAIRKGYMSEDAQWAISETAPEAICLAALRA- : UniRef90_T0D8A1
UniRef90_Q9ZXC0 : --------DKREIDRLIAEKVMGWKTQTFNIGVTSVYELTIPKQTENLDQTWSVVEKF-KLVKIERDSTRSYAPYLAVIPTEERVAIAATPQMAICIVALNA- : UniRef90_Q9ZXC0
UniRef90_UPI0002F8C5B0 : -------MDKREIDRLIA-KIMGWENIDILEAFDDEFAETITLGVKRIDHAWRIVEKLRDTRIFNINDVEQDDQVYCYFDGFHAINYEKSAPTAICLAALKAV : UniRef90_UPI0002F8C5B0
UniRef90_W4CHI9 : ------AMEPGPLDEITAEIACGRKVRDKKVIDEGAGRYNIPRYSSDISAAWEVLEKFKQYSVMKAAGWGKEYDCRIWVGGDQWSVQAKTASEAICKAALLAV : UniRef90_W4CHI9
UniRef90_UPI00046F8852 : ----------------------------FSEIDRMKHVCGVPEYSTDISAAWEVYEKVDLECEHSNLRHGKMGAWSCTFDNI-WFDGAHTAPEAICKAALLAI : UniRef90_UPI00046F8852
UniRef90_X1RF51 : ------AMEPKELDILVAEKVMNHPVPDFTCVDEGDVPKWIPDYSTDPSAAWPVVEKLTEEWRNKPISIEVTYDCKKNWNEPIFSGSCEAAPEAICKAAL--- : UniRef90_X1RF51
UniRef90_F6CHQ5 : ----------KEMDRLIAEKLMGWQVKKT-VGSDGAEEWWIPQPSTDVKAAWDVVEKLRQRVQAMPDGILPSGKIKGHSSDIEKYVYGTTAPEAICRLALE-- : UniRef90_F6CHQ5
UniRef90_X1RHG0 : ----------EELDRLVATEVMGEPVPEFTYGEGDIPTWRPLPYSTDISAAWLVVEKLAEERDHEPISIEVMYDCGAYEAKIETWNDGKIAPEAICKAALLT- : UniRef90_X1RHG0
UniRef90_R8JSN7 : ------------IDKVIAERVMGW-------NHNGEYHTYYFSPSTDMNHTLLVMEKLKEDCGIVKSKEATRDDYYCSISTGSIYSIAKTPQMAVCLSALKAV : UniRef90_R8JSN7
UniRef90_X4ZWQ2 : -----------ELDALIAEHIFRWRRIKGPSFDYDAFRYMPPKGSKDISAAWEVVDKMRNNIYLDVRVWPVDYQVLPHQDEDRWIVKKQSLPESICKAALLAV : UniRef90_X4ZWQ2
UniRef90_X1UF02 : ------AMNPSQLGDLVAIEVMEWRTPEGFWVDAEGLHGWYPW--RDISAAWQVVDKNDYSWFDVWRAYGKFYVRDGRLKGLEVVAGCETAPVAICKAALLAI : UniRef90_X1UF02
UniRef90_UPI000471EB36 : -----NWMNPQERNIWVAVKVMGKKKSPINYGISSEGFDHYPKYSTGMGAAWEVIEHMKKQIFSKRRRYLIELQQLTVFGEGHVIAIWHMTPERICLAALIA- : UniRef90_UPI000471EB36
UniRef90_X0RTG9 : -----------ELNVLVARWVKGWFVSDSIVGSRVTHKSEPFEPSTDIAAAWEVVDELNRRGWWVKFNHCLSNGIPAYQAEFTVYAVGDTAPLAICRAALKAV : UniRef90_X0RTG9
UniRef90_X1RVN8 : -----------ELDRLVAEEVMGEPMPEFSPVKSPKGNWDIPRFSTDISAAWRVLEKLKRDWDISLENYDSH--RKFYLGKESGATYEE-LPEAICRAAL--- : UniRef90_X1RVN8
UniRef90_W2E8N3 : -----DTLSNLDRDEWVATVVMGWSWS------YQFYPWQL------IADAWRVLEKLRGKWFVRIADFGRHWGVELVSETAAVSVTRETVQEAICLAALIAV : UniRef90_W2E8N3
UniRef90_X1QVG7 : -----------KLDVLVAEKVMNHPMPD-SIPEDALDLYWIPYYSTDISAAWQVEEKLTEEWRNKPISIEVSYDCGAYETKIE-------------------- : UniRef90_X1QVG7
UniRef90_X1M805 : ----------EELDKLVATEVMEELMPEFTIGDEGDIPTWRPVFSTDFSAAWQVVEKMEKHLKYSQNRHEGVTWFFMQSGQGIFEATGRDIKEAICKAALLT- : UniRef90_X1M805
UniRef90_X1BE26 : ---------------------------------------GAPPFSTDIAAAWTVLERLNETRILTKNEDGKYIICDAHDIGRWPEYYAATASLAICLVALKA- : UniRef90_X1BE26
UniRef90_X1U3E0 : --------------------------------DEGDVPKWVPDYSTDISAAWQVVEKLTWDVHLEPEDEEGKVGWEINGDCGKVVAEGKAAPEAISKAALIA- : UniRef90_X1U3E0
UniRef90_X1I3N2 : ----------------------------------------LPEYSEDISATWQILKRLREEYWWVIMELLRTPPIKVEVNAGTPF---EKLPEAICKAALLA- : UniRef90_X1I3N2
UniRef90_UPI000469A7F4 : -------MSEQQIIETLATKVMGWKADTFHLTANGWEIWSLPEGGHNIADAWQVLTKLKETYGVVYNDVAGVWECHAGYDGFAIDVEGKTECEAICNA----- : UniRef90_UPI000469A7F4
UniRef90_X1V5S2 : ------AMEGKELDTLVTEKVMGHPMPDF-IPEDALDLYDIPKYSTDISAAWPVVQKM--------------------------------------------- : UniRef90_X1V5S2
UniRef90_L0EI99 : -----NEMTPDERNRFIATHVMGWYPNTPTSAFYITHTSNFFKPAERIASAFIVF-----DYILVPDKTSLIP---CESGSGVFWEVCPTPELAICRASI--- : UniRef90_L0EI99
UniRef90_UPI0003743916 : -------MTEQQIIETLATKVMEWHHKKIVVLNEGIEKVGVTEWNQNLADAWQVVEKLLENYLLFDLSATEDGIDTTFINTKEWEASGDTPQEAICTAAMELV : UniRef90_UPI0003743916
UniRef90_X0Y831 : -------MNDRHIDRDVARFV--WPDIETFLDDGNTYVRPVPHYSTDIAAAWELMGQMKDYLFCLRENTEVDWACAAYSYEITYDDICDTAPRAICLAFMNA- : UniRef90_X0Y831
UniRef90_UPI000470F835 : --------------------------------------------SAEISAAWRIVERLKTTMDVSVTDGNGKYASEC---GRWTVDDCNTAPEAICKSALLAV : UniRef90_UPI000470F835
UniRef90_E3EKL9 : -----NRMSALERNVWVATAVMGYKADPFRILDSKGCSTAVSNYSEDFAAAGEVFEKIKYGAWIEVAWNPRKQHYRGFIGAKNVIELGRTAPEAICLSALISI : UniRef90_E3EKL9
UniRef90_L5MKD2 : -------MTEQQIIETLATKVMGWKVDNPDYMVGVQVANWNPL--QNIADAWQLLTKLKETYGIVYNDETELWECHAGYDGFAIDEEGKTECEAICNAGMKA- : UniRef90_L5MKD2
UniRef90_U4WVT1 : -------MTDQQIILTLATKVMGWKYQETDFWFGDNGNLWNPL--ENIADAFQVVDRLSHFYIFELVGVENGWVAIFKLVDVNFIGAGKTREKAICKAAMEVV : UniRef90_U4WVT1
UniRef90_C3CUJ1 : ----------------IGTKVMGWSIETSMDGLNDYYESNTFKPSRNMKHAWMVIERMHYNCSFSLSSTELNFKCEFRFGNDSVEYIDPCQCVAICVASLKV- : UniRef90_C3CUJ1
UniRef90_B4CW86 : -------------------------------------------YSSDLALAWEVVER------ISPHSEPLHYACFGSLPE----SSSKSAPVAICLAALRA- : UniRef90_B4CW86
UniRef90_C0Z797 : ---------------------------------------WCPLH--NIADAWMIAENL--YIGVLPQSPGAPEDMRFYDRNIEI--YAKTAQEAICKAALEAV : UniRef90_C0Z797
UniRef90_E1Y8B7 : ----------RNLDIYVAEKIMRNKVISDPIMGDTEVFTTLTAYSEDLSKAQLVVLKMASMGYAKAGLWE-----------------SEKRPEVICRAALLT- : UniRef90_E1Y8B7
UniRef90_K9U4Q6 : -----------DLDSLIAEK----------------FNLFVRPYSTDIRAALELVAWDLENSDFRVEEHSLPGLVASFIPNGVW-GYGETAPLAICQAAL--- : UniRef90_K9U4Q6
UniRef90_V6IY13 : -------MNNLEIDRKLAEKVMPYPIIGACSPKDGYWTEWNP--TGNMKDAWEVFNKLDELYRSLNIWVAMRYENDAH--PIVNAQSDESAEKAICLAALKVI : UniRef90_V6IY13
UniRef90_S5M6D7 : -------MTEQQIIKTLATEVMGWRWIYHVELDWGWHSPWNPL--ENIADAWMIVEKFKNGDPILRAKFAVLLPVIIY----------EIEPKDICKAAMKVV : UniRef90_S5M6D7
UniRef90_C3CTP2 : ------------MNTLLAVKVMGFKWGRDETFKEGEKKNEYTKPSTNLEHAWMIANQLTKDNGLELDSFDLNFECGIWSSKGYWKVEAKTPELAISLSAL--- : UniRef90_C3CTP2
UniRef90_UPI000344984D : ----------KDLDLLIAE------------------RFELPEYSKDIRAAFEVVWAMENTDYFRSEKEALPGNPFGVGFERQVWGYSTTAPLAICKQAL--- : UniRef90_UPI000344984D
UniRef90_R9TNM5 : -----------ELDKIVAVQVMGWEIRQEDLPDHQSYREYYEKYSKYIDAAWEVEEQIKEYCQALKQVVVSTGEYVGLFD------YIHATPEQRCKAALLAV : UniRef90_R9TNM5
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101 :
OrigSeq : LYFQSNAMKPRDINKLIASKIFGYEIKDDNIIKDGRYRLGIPLYSQNIESAWQVVEKLEYDVKVTKTDLKPKYQVHVFVPGGVKMVFAETAPMAICKGALASV : OrigSeq
Jnet : ----------HHHHHHHHHHH--------------------------HHHHHHHHHHHHH--EEEE-------EEEEEE---EEEEE---HHHHHHHHHHH-- : Jnet
jhmm : ------------HHHHEEEE---------------------------HHHHHHHHHHHHH--EEEE-------EEEEEE---EEEEE---HHHHHHHHHHH-- : jhmm
jpssm : ----------HHHHHHHHHHH---------------------------HHHHHHHHHHHHHEEEEE-------EEEEEE---EEEEE---HHHHHHHHHHH-- : jpssm
Lupas 14 : ------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : ------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : ------------------------------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : --B----B----BB-BBB--BB-B-B----BB----B---B--BB--B--BB-BB--B---B-B-B--B---B-BBBBB---B----B--BBBBBB-BBB--- : Jnet_25
Jnet_5 : ----------------BB--B-----------------------B-----B--BB--B---B------------B-B-B--------------BBB-BBB--- : Jnet_5
Jnet_0 : ----------------BB--------------------------------B------B------------------B----------------BBB--B---- : Jnet_0
Jnet Rel : 8998888762029999543421577777545667776777777656613589988887413232233546774589985585589844761789999987449 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.