JALVIEW_ANNOTATION # Created by concise2jalview using 'jp_YqFXLZp.concise' as input NO_GRAPH Lupas_21 Coiled-coil prediction windowed over 21 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH Lupas_14 Coiled-coil prediction windowed over 14 residues -|-|c|c|c|c|c|c|c|c|c|c|c|c|c|c|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH Lupas_28 Coiled-coil prediction windowed over 28 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH jnetpred Final secondary structure prediction by Jnet ||H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|E|||||||||H|H|H|H|H|H|H|H|H|H|H|||H|E|E|E|||H|H|H|H|H|H|H|H|H|||||||E|E|E|E|||||||H|H|H|H|H|H|H|H|H||||E|E|E|||H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|E|E|E|||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|E|E||||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||E|E||||H|H|H|H||||||||||H|H|H|H|H|H|H|H||||||||||||||||||| BAR_GRAPH JNETCONF Confidence of Jnet prediction 0 (low) -> 9 (high) 9|7|5|8|9|9|9|9|9|9|9|9|9|8|6|1|5|8|8|5|5|8|8|8|6|2|6|7|8|6|5|4|1|7|8|9|9|9|9|9|9|9|9|1|0|0|1|0|1|1|1|6|4|8|9|9|9|9|9|8|7|0|4|8|8|8|4|5|7|6|4|4|7|8|7|6|3|6|8|9|9|9|9|8|7|4|4|8|7|0|1|0|6|4|6|8|9|9|9|9|9|9|8|6|1|6|9|8|0|1|8|9|8|8|8|5|3|6|7|7|7|7|7|7|6|4|1|5|5|8|9|9|9|9|9|9|9|8|7|1|2|5|4|2|3|2|2|1|0|1|6|7|7|7|7|7|7|6|6|3|4|5|8|9|9|9|9|9|9|9|9|9|9|8|6|1|5|5|7|7|0|2|0|5|6|3|4|4|4|3|2|5|7|8|8|8|7|4|2|1|3|6|6|6|6|5|1|4|7|7|7|7|7|7|7|7|7|7|6|7|7|7|6|6|8|8 NO_GRAPH JNETSOL25 Jnet solvent relative accessibility prediction at 25% cut-off B|-|B|-|B|B|-|-|B|B|-|-|B|B|-|-|B|-|B|-|B|B|B|B|B|B|B|-|B|B|B|B|B|B|B|-|B|B|-|B|B|B|-|B|B|B|B|B|B|B|B|B|B|-|B|B|B|-|B|B|-|B|-|B|-|B|B|B|B|B|B|B|B|B|B|-|-|-|B|B|-|B|B|B|-|B|-|B|-|B|B|B|B|B|-|-|B|B|-|B|B|B|-|B|-|-|-|-|-|B|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|B|-|-|B|-|-|B|B|-|-|B|-|-|B|-|-|B|-|B|B|B|B|B|B|B|B|B|B|B|-|-|-|-|B|-|B|B|-|-|B|B|-|B|B|B|-|B|B|-|-|B|-|-|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|B|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|-|-|-|-|-|-|-|B|-|-|B|B NO_GRAPH JNETSOL5 Jnet solvent relative accessibility prediction at 5% cut-off -|-|-|-|-|B|-|-|B|B|-|-|B|-|-|-|-|-|-|-|B|B|B|B|B|-|-|-|-|-|-|-|-|B|-|-|B|B|-|B|B|-|-|-|B|-|-|B|B|B|B|-|-|-|-|B|-|-|B|-|-|-|-|-|-|-|-|-|B|B|B|-|-|-|-|-|-|-|-|B|-|-|B|B|-|-|-|B|-|B|-|B|-|B|-|-|B|B|-|-|B|-|-|-|-|-|-|-|-|B|-|B|B|B|-|B|-|B|-|B|-|-|B|-|B|-|-|-|-|B|-|-|-|-|-|-|B|-|-|-|-|-|B|-|B|-|B|B|B|B|B|B|B|-|-|-|-|-|-|-|-|-|B|-|-|B|B|-|-|B|-|-|B|B|-|-|-|-|-|-|-|B|B|B|B|B|B|B|B|B|-|-|-|-|-|-|B|-|B|B|B|B|B|B|B|B|B|B|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH JNETSOL0 Jnet solvent relative accessibility prediction at 0% cut-off -|-|-|-|-|B|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|B|-|B|-|-|-|-|-|-|-|-|-|-|-|B|B|-|-|B|-|-|-|B|-|-|B|B|B|-|-|-|-|-|B|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|B|B|-|-|-|-|-|-|-|-|-|B|-|B|-|B|B|B|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH JNETHMM Jnet prediction using HMMer profiles ||H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|E|||||||||H|H|H|H|H|H|H|H|H|H||||E|E|E|E|E||H|H|H|H|H|H|H|H|H|||||||E|E|E|E|||||||H|H|H|H|H|H|H|H|H||||E|E|E|||H|H|H|H|H|H|H|H|H|H|H||||||E|E|E|E|E|E|||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|E|E|E|||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||E|E|E||||H|H|H|H||||||||||H|H|H|H|H|H|H|||||||||||||||||||| NO_GRAPH JNETPSSM Jnet prediction using PSSM profiles ||H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|E|E|||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||H|H|H|H|H|H|H|H|H|H||||||E|E|E|E|||||||H|H|H|H|H|H|H|H|H|||||E||||H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|E|E|E|||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||||||||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||||||H|H|H|H|||||||||E|E|H|H|H|H|H|H|H||||||||||||||||||| NO_GRAPH JNETJURY Positions where Jnet predictions do not agree | | | | | | | | | | | | | | | | | | | | | | | | |*| | | | | | |*| | | | | | | | | | |*|*|*|*|*|*|*|*| | | | | | | | | | |*| | | | | | | | | | | | | | | | | | | | | | | | | | | |*| |*| | | | | | | | | | | | | | | | | |*| | | | | | | | | | | | | | | | | | | | | | | | | | | | | |*| | | |*|*|*|*|*|*|*| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |*|*|*| | | | | | | | | | | | | | | |*|*| | | | | | |*| | | | | | | | | | | | | | | | | | |