SILENT_MODE BLOCK_FILE jp_iLVrUyD.concise.blc MAX_NSEQ 532 MAX_INPUT_LEN 534 OUTPUT_FILE jp_iLVrUyD.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 141 521 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 522 141 531 H SPACE SUB_CHARS 1 522 141 531 E SPACE SUB_CHARS 1 522 141 531 - SPACE STRAND 13 525 20 COLOUR_TEXT_REGION 13 525 20 525 51 STRAND 25 525 29 COLOUR_TEXT_REGION 25 525 29 525 51 STRAND 34 525 36 COLOUR_TEXT_REGION 34 525 36 525 51 STRAND 46 525 53 COLOUR_TEXT_REGION 46 525 53 525 51 STRAND 57 525 62 COLOUR_TEXT_REGION 57 525 62 525 51 STRAND 68 525 70 COLOUR_TEXT_REGION 68 525 70 525 51 STRAND 76 525 78 COLOUR_TEXT_REGION 76 525 78 525 51 STRAND 87 525 94 COLOUR_TEXT_REGION 87 525 94 525 51 STRAND 99 525 104 COLOUR_TEXT_REGION 99 525 104 525 51 STRAND 111 525 115 COLOUR_TEXT_REGION 111 525 115 525 51 STRAND 13 530 20 COLOUR_TEXT_REGION 13 530 20 530 51 STRAND 26 530 29 COLOUR_TEXT_REGION 26 530 29 530 51 STRAND 34 530 36 COLOUR_TEXT_REGION 34 530 36 530 51 STRAND 46 530 53 COLOUR_TEXT_REGION 46 530 53 530 51 STRAND 57 530 62 COLOUR_TEXT_REGION 57 530 62 530 51 STRAND 68 530 71 COLOUR_TEXT_REGION 68 530 71 530 51 STRAND 76 530 79 COLOUR_TEXT_REGION 76 530 79 530 51 STRAND 87 530 94 COLOUR_TEXT_REGION 87 530 94 530 51 STRAND 99 530 104 COLOUR_TEXT_REGION 99 530 104 530 51 STRAND 111 530 115 COLOUR_TEXT_REGION 111 530 115 530 51 STRAND 13 531 20 COLOUR_TEXT_REGION 13 531 20 531 51 STRAND 25 531 29 COLOUR_TEXT_REGION 25 531 29 531 51 STRAND 35 531 35 COLOUR_TEXT_REGION 35 531 35 531 51 STRAND 47 531 51 COLOUR_TEXT_REGION 47 531 51 531 51 STRAND 56 531 62 COLOUR_TEXT_REGION 56 531 62 531 51 STRAND 89 531 93 COLOUR_TEXT_REGION 89 531 93 531 51 STRAND 100 531 104 COLOUR_TEXT_REGION 100 531 104 531 51 STRAND 111 531 115 COLOUR_TEXT_REGION 111 531 115 531 51 HELIX 88 531 88 COLOUR_TEXT_REGION 88 531 88 531 50