QUERY : TYLQSSEGKFIPATKRPDGTWRKARRVKDGYVP : QUERY
UniRef90_A0A034WHC3 : TYLTDSDGKFIPATQRPDGTWRKARRVKDGYVP : UniRef90_A0A034WHC3
UniRef90_L7LY68 : -YATDEKGSYIPATQRPDGTWRKARRVKDGYVP : UniRef90_L7LY68
UniRef90_Q640E9 : -YVSDDSGKYIASTQRPDGSWRKQRKVKEGYVP : UniRef90_Q640E9
UniRef90_T1PMB3 : SYSTNNEGTFIPASQRPDGTWRRARRVKDGYVP : UniRef90_T1PMB3
UniRef90_D6WV11 : -IVTESGDTFIPASQRPDGTWRKARRVKEGYVP : UniRef90_D6WV11
UniRef90_K7J0X0 : -YIKDDQGTFIPASQRPDGTWRKPRRVKDGYVP : UniRef90_K7J0X0
UniRef90_W5KJU9 : -YVTDESGKYIAATQRPDGTWRKPRRVKEGYVP : UniRef90_W5KJU9
UniRef90_X1Y6U8 : -----SSGKFIPATQRPDGTWRKPRRVRDGYVP : UniRef90_X1Y6U8
UniRef90_S4PCU3 : -YEHDDGGKFIPATQRPDGSWRKPRRIKDGYVP : UniRef90_S4PCU3
UniRef90_T1K5R1 : -YVKDDAGTFIAASQRPDGSWRKPRRVKEGFVP : UniRef90_T1K5R1
UniRef90_W4YHX6 : --ETDETGQYLPATQRPDGTWRKPRRVRPGYVP : UniRef90_W4YHX6
UniRef90_UPI00032AE0E3 : -YERDSSGKYIASTQRPDGTWRKQRRVKEGYVP : UniRef90_UPI00032AE0E3
UniRef90_U6PSW6 : ---TSQGETFIAATQRPDGTWRKARRVKDGYIP : UniRef90_U6PSW6
UniRef90_H3FCM9 : -ILTADGDTFIAASQRPDGTWRKPRKVKDGYIP : UniRef90_H3FCM9
UniRef90_E0VK86 : --------TFIAATQRPDGTWRKQRRVKDGYIP : UniRef90_E0VK86
UniRef90_R7VLY4 : ------GEYFIPASQRPDGTWRKARKVKDGYVP : UniRef90_R7VLY4
UniRef90_UPI00046C0815 : -YVTDESGKYIASTQRPDGTWRKQRKVKEGYVP : UniRef90_UPI00046C0815
UniRef90_C1LHL1 : --VRDDNGNIIPPTQRPDGTWRKAVRVKEGYIP : UniRef90_C1LHL1
UniRef90_T1GI83 : --------KFIPATQRPDGTWRKARRVRDGYIP : UniRef90_T1GI83
UniRef90_F6QKM5 : -IVRDDRGSFIPATQRPDGTWRKAQRVKEGYVP : UniRef90_F6QKM5
UniRef90_UPI0003991AFC : -------GKYIASTQRPDGTWRKQRRVKEGYIP : UniRef90_UPI0003991AFC
UniRef90_F1LE26 : -IKTKSGETFIAASQRADGTWRKARRVKEGYVP : UniRef90_F1LE26
UniRef90_F2UPE5 : ---ADEKPTFIPATQRPDGTWRKPRRVRPGYIP : UniRef90_F2UPE5
UniRef90_R4G5R9 : --------TFIPPSQRPDGTWRKPRRVKEGYVP : UniRef90_R4G5R9
UniRef90_R4G5R9 : --VKTNAGNVVPASQRPDGTWRKERRIRTGYTP : UniRef90_R4G5R9
UniRef90_J9JT99 : -ILKDDKGYFVPATQRADGTWRKERRLKENYIP : UniRef90_J9JT99
UniRef90_D7FZH2 : ---KENGDVVLPATQRPDGTWRKERRIKKGYIP : UniRef90_D7FZH2
UniRef90_M0R7F2 : TFEATGTDKCMVSTQRPDGTWRKQHRFQEGYVP : UniRef90_M0R7F2
UniRef90_Q4MYX2 : SYFTDESGKYIIPSKRPDGTYRKEIKIRPGYVP : UniRef90_Q4MYX2
UniRef90_U6IA35 : --VNEKGEHIIPASRRPDGTWRKEIKVKAGYIP : UniRef90_U6IA35
UniRef90_I1GET6 : -IVYDSSGQYIPGTQRPDGTWRKAIRVKEGYIP : UniRef90_I1GET6
UniRef90_B3RQS8 : ----EKSAYSIPATKRPDGTWRKERKVKEGYVP : UniRef90_B3RQS8
UniRef90_M0RCI6 : -YVTDEGGNYIASTQRPDGTRHKQLRVKEGYV- : UniRef90_M0RCI6
UniRef90_A7SX96 : -----EGDSWIPATQRPDGTWRKARRVKDGYIP : UniRef90_A7SX96
UniRef90_L1K1F1 : ----DDKYDVIPASQRPDGTWRKEVKVKKGYVP : UniRef90_L1K1F1
UniRef90_T2M725 : --LMETSGNVIAASQRPDGTWRKERKVKVGFVP : UniRef90_T2M725
UniRef90_F0ZH64 : -----SNHTVIKGTQRADGTWRKDIKVKEGFVP : UniRef90_F0ZH64
UniRef90_E9C4Z4 : -YKTNAQGTVIAASRRPDGTMRKERRVKAGYIP : UniRef90_E9C4Z4
UniRef90_J9J7A4 : ------QDKFIPATRREDGTWRKSLKVKPGYTP : UniRef90_J9J7A4
UniRef90_E9FYZ9 : ---------FLPASRRPDGTWRKPRRVKEGYVP : UniRef90_E9FYZ9
UniRef90_D3B5Q2 : ---KDKDHIIIPATQRADGTWRKEIKVRAGYIP : UniRef90_D3B5Q2
UniRef90_G3GTK3 : TPEATGTGKYIASTQRPDGTW--QWRVKEGYVP : UniRef90_G3GTK3
UniRef90_A0A015JE90 : ----DNNERVIPATRRADGTVRKERRVRPGFVP : UniRef90_A0A015JE90
UniRef90_F4Q0J1 : ---------VIPASQRPDGTWRKEIRVRPGFIP : UniRef90_F4Q0J1
UniRef90_U6KTA5 : TYLTNTGHRLIPASRRPDGTLRRPIKVRPGYTP : UniRef90_U6KTA5
UniRef90_E1ZML8 : --VSEAGERIIAQSKRPDGTVRKERRVRAGYVP : UniRef90_E1ZML8
UniRef90_D8TGT3 : TTVLETGEKILPGSVRPDGTVRKERRIRAGYTP : UniRef90_D8TGT3
UniRef90_D7FYZ4 : ----------IPATQRPDGTWRKARKIRTGF-- : UniRef90_D7FYZ4
UniRef90_M0R8Y8 : -------GKYIASTQRPDRTWWKQHRVK-GYVP : UniRef90_M0R8Y8
UniRef90_F0VN31 : ----TTGEKIIPGSRRPDGTYRKEIRVRAGYIP : UniRef90_F0VN31
UniRef90_E5SCV8 : --VAEDGKWYIPPSQRSDGTWRPAVQVKPGYIP : UniRef90_E5SCV8
UniRef90_UPI00032A503F : -----DGERIIAPTRRPDGTYRKQIRIRPGYVP : UniRef90_UPI00032A503F
UniRef90_J4DPL0 : SYVVDNSTKYIMPTKRPDGTVRKEIKVRPGYVP : UniRef90_J4DPL0
UniRef90_I0YW00 : ----DDGERVISGTRRPDGTYRKDVKVRAGYVP : UniRef90_I0YW00
UniRef90_K1Y5Z9 : -IVESNGERHIPSSVRPDGTKRKEIKIRPGYKP : UniRef90_K1Y5Z9
UniRef90_L1LCY9 : SYYVDGGEKFILPTKRPDGTLRKKIKVKPGYTP : UniRef90_L1LCY9
UniRef90_M7PMZ9 : -----DGSSIIPSSVRPDGSIRSERKVRPGYVP : UniRef90_M7PMZ9
UniRef90_A0A059AT73 : -----EGERLLAPSRRPDGTYRKPIRIRAGYVP : UniRef90_A0A059AT73
UniRef90_T0S6H5 : --ETASGDVIIPSSQRPDGTFRKEIKVRKGYVP : UniRef90_T0S6H5
UniRef90_S2JAF0 : -IIQVGEERWIPGSQRADGSYRKERKVRPGFVP : UniRef90_S2JAF0
UniRef90_W9XKQ9 : ---TADGASYIPASKRADGSTRKEIRVRPGYRP : UniRef90_W9XKQ9
UniRef90_A9ST17 : ------TDRVIAPTRRPDGSLRKEIRIRAGYTP : UniRef90_A9ST17
UniRef90_M2MX10 : ---TPNGASIIPSSTRPDGSVRKEIRVKPGYRP : UniRef90_M2MX10
UniRef90_M4BJA8 : -----DGEVVVPASRRADGSLRKPIRIRKGYVP : UniRef90_M4BJA8
UniRef90_G0SC95 : -IVTDSGERIIPASVRADGSIRKEIRVRDGYIP : UniRef90_G0SC95
UniRef90_F4RYU8 : ----NTGKRLVAASKRPDGTVRKEIRIRPGYTP : UniRef90_F4RYU8
UniRef90_R7YUE4 : ---TTTGERHIPSSVRPDGSLRKEIRVRPGYRP : UniRef90_R7YUE4
: 1---------11--------21--------31- :
OrigSeq : TYLQSSEGKFIPATKRPDGTWRKARRVKDGYVP : OrigSeq
Jnet : --EE----EEEE--------------------- : Jnet
jhmm : ---------EEE-----------HHH------- : jhmm
jpssm : -EEEE---EEEE--------------------- : jpssm
Lupas 14 : --------------------------------- : Lupas 14
Lupas 21 : --------------------------------- : Lupas 21
Lupas 28 : --------------------------------- : Lupas 28
Jnet_25 : ---------BB--B------B-----B---B-- : Jnet_25
Jnet_5 : ----------B---------------------- : Jnet_5
Jnet_0 : --------------------------------- : Jnet_0
Jnet Rel : 722136851886012577676662114678899 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.