Last position-specific scoring matrix computed, weighted observed percentages rounded down, information per position, and relative weight of gapless real matches to pseudocounts A R N D C Q E G H I L K M F P S T W Y V A R N D C Q E G H I L K M F P S T W Y V 1 T 0 -2 0 -1 -1 -1 -1 -2 -2 -2 -2 -1 -1 -3 -2 3 5 -3 -2 -1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 67 0 0 0 0.62 0.19 2 Y -3 -1 -3 -4 -3 -3 -3 -4 0 2 -1 -3 -1 3 -4 -3 -2 1 7 -1 0 3 0 0 0 0 0 0 0 18 0 0 0 8 0 0 0 0 71 0 1.07 0.34 3 L 0 -3 -3 -3 -2 -1 1 -4 -3 1 2 -1 0 0 -3 -1 -1 -3 -2 4 7 0 0 0 0 2 12 0 0 6 18 3 0 5 0 4 0 0 0 43 0.32 0.39 4 Q 0 1 -1 -2 -3 0 1 -3 1 -2 -3 2 0 -3 -2 0 4 -4 -3 -1 8 8 0 0 0 3 8 0 4 0 0 20 3 0 0 3 41 0 0 3 0.41 0.38 5 S -2 -2 2 6 -4 -1 1 -2 -2 -3 -4 -1 -3 -4 -3 0 2 -5 -4 -2 1 0 10 55 0 1 7 0 0 0 0 3 0 0 0 5 15 0 0 3 0.77 0.40 6 S 0 -2 2 3 -3 0 3 1 -2 -4 -4 0 -3 -4 -1 2 0 -4 -3 -3 5 0 11 18 0 3 27 10 0 0 0 3 0 0 1 18 3 0 0 0 0.47 0.40 7 E -1 -1 2 0 -3 1 0 2 -2 -3 -3 1 -3 -4 -1 2 2 -4 -3 -2 2 2 10 5 0 6 4 19 0 0 1 11 0 0 2 23 13 0 0 2 0.33 0.39 8 G -1 -3 -1 2 -4 -1 1 5 1 -4 -4 -2 -3 -4 -2 -1 -2 -3 -1 -4 2 0 1 12 0 2 9 64 5 0 0 0 0 0 1 2 0 0 2 0 0.82 0.35 9 K -1 1 2 -1 -3 0 1 -2 -1 -2 -3 4 -2 -3 -1 0 2 -3 1 -2 1 3 10 2 0 3 6 0 0 2 0 40 0 0 1 3 21 0 7 2 0.37 0.33 10 F -2 -3 -3 -4 2 -3 -4 -4 -1 0 -1 -3 -1 5 -4 -2 -2 1 5 1 0 0 0 0 6 0 0 0 0 5 0 0 0 40 0 2 0 1 33 13 0.76 0.29 11 I -2 -4 -4 -4 -2 -3 -4 -4 -4 6 1 -3 2 -1 -4 -3 0 -3 -2 2 0 0 0 0 0 0 0 0 0 81 3 0 6 0 0 0 5 0 0 5 0.70 0.28 12 P 3 -2 -3 -2 -2 -2 -2 -2 -3 -1 -2 -1 -2 -3 6 -1 0 -4 -3 0 34 0 0 0 0 0 0 0 0 4 0 3 0 0 48 0 5 0 0 6 0.94 0.28 13 A 4 -2 -2 -2 -2 -1 -1 0 -2 -3 -3 -1 -2 -3 1 3 0 -4 -3 -2 61 0 0 0 0 0 0 4 0 0 0 0 0 0 6 28 0 0 0 0 0.57 0.28 14 T 0 -2 -1 -2 -2 -1 -1 -2 -2 -2 -2 -1 -2 -3 -2 3 5 -3 -2 -1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 72 0 0 0 0.74 0.28 15 K -2 2 -1 -1 -4 7 1 -3 0 -4 -3 2 -1 -4 -2 -1 -2 -3 -2 -3 0 10 0 0 0 83 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0.98 0.28 16 R -2 7 -1 -2 -4 0 -1 -3 -1 -4 -3 1 -2 -4 -3 -2 -2 -4 -3 -3 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.24 0.28 17 P 1 -3 -3 -2 -3 -2 -1 -2 -3 -3 -3 -2 -3 -4 7 -1 -2 -4 -4 -3 16 0 0 0 0 0 4 0 0 0 0 0 0 0 80 0 0 0 0 0 1.75 0.28 18 D -3 -2 1 7 -4 -1 1 -2 -2 -4 -5 -1 -4 -4 -2 -1 -2 -5 -4 -4 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.40 0.28 19 G -1 -1 -1 -2 -3 -2 -3 6 -3 -5 -4 -2 -3 -4 -3 -1 -2 -3 -4 -4 0 5 0 0 0 0 0 95 0 0 0 0 0 0 0 0 0 0 0 0 1.33 0.28 20 T -1 -2 -1 -2 -2 -1 -2 -2 -2 -2 -2 -1 -2 -3 -2 1 6 -3 -2 -1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 92 0 0 0 0.86 0.28 21 W -3 0 -4 -5 -3 -2 -3 -3 -3 -3 -2 -3 -1 0 -4 -3 -3 11 2 -2 0 7 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 85 4 2 2.39 0.28 22 R -2 7 -1 -2 -4 0 -1 -3 2 -4 -3 1 -2 -3 -3 -1 -2 -3 -2 -3 0 89 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 1.05 0.27 23 K -1 2 -1 -1 -4 1 0 -2 -1 -3 -3 6 -2 -4 -2 -1 -1 -4 -2 -3 0 2 0 0 0 0 0 0 0 0 0 94 0 0 0 0 0 0 0 0 0.89 0.27 24 A 2 -1 -1 0 -3 4 3 -2 -1 -3 -3 0 -2 -4 3 0 -1 -4 -3 -3 23 0 0 3 0 29 22 0 0 0 0 0 0 0 19 4 0 0 0 0 0.57 0.28 25 R -2 6 -2 -3 -4 0 -1 -3 2 1 -1 1 -1 -3 -3 -2 -2 3 -2 -1 0 69 0 0 0 1 0 0 6 12 6 0 0 0 0 0 0 4 0 2 0.70 0.28 26 R -2 6 -1 -2 -4 0 -1 -3 -1 -4 -3 3 -2 -4 -3 -1 -2 -4 -3 -3 0 76 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 1.02 0.28 27 V -1 -3 -4 -4 -2 -3 -3 -4 -4 3 1 -3 0 1 -3 -3 -1 -3 -2 5 0 0 0 0 0 0 0 0 0 9 5 0 0 6 0 0 0 0 0 80 0.66 0.28 28 K -2 3 -1 -2 -4 2 0 -2 -1 -4 -3 6 -2 -4 -2 -1 -2 -4 -3 -3 0 16 0 0 0 6 0 0 0 0 0 79 0 0 0 0 0 0 0 0 0.85 0.28 29 D -1 -1 -1 3 -4 0 5 -1 -2 -4 -4 0 -3 -4 2 -1 -1 -4 -3 -2 5 0 0 22 0 0 52 3 0 0 0 3 0 0 13 0 2 0 0 2 0.68 0.28 30 G -1 -3 0 -2 -3 -3 -3 6 -3 -5 -5 -2 -4 -4 -3 -1 -2 -3 -4 -4 0 0 5 0 0 0 0 95 0 0 0 0 0 0 0 0 0 0 0 0 1.35 0.28 31 Y -3 -3 -3 -4 -3 -2 -3 -4 1 -2 -2 -3 -2 4 -4 -3 -3 1 8 -2 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 87 0 1.34 0.28 32 V -1 -3 -4 -4 -2 -3 -3 -4 -4 4 0 -3 0 -1 -3 -2 1 -4 -2 5 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 7 0 0 65 0.63 0.27 33 P -2 -3 -3 -2 -4 -2 -2 -3 -3 -4 -4 -2 -3 -4 8 -2 -2 -5 -4 -3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 2.32 0.24 K Lambda Standard Ungapped 0.1348 0.3158 Standard Gapped 0.0410 0.2670 PSI Ungapped 0.1657 0.3154 PSI Gapped 0.0507 0.2670