SILENT_MODE BLOCK_FILE jp_G6DBx6n.concise.blc MAX_NSEQ 696 MAX_INPUT_LEN 698 OUTPUT_FILE jp_G6DBx6n.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 140 685 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 686 140 695 H SPACE SUB_CHARS 1 686 140 695 E SPACE SUB_CHARS 1 686 140 695 - SPACE STRAND 62 689 68 COLOUR_TEXT_REGION 62 689 68 689 51 STRAND 73 689 78 COLOUR_TEXT_REGION 73 689 78 689 51 HELIX 10 689 21 COLOUR_TEXT_REGION 10 689 21 689 50 HELIX 24 689 42 COLOUR_TEXT_REGION 24 689 42 689 50 HELIX 48 689 58 COLOUR_TEXT_REGION 48 689 58 689 50 HELIX 61 689 61 COLOUR_TEXT_REGION 61 689 61 689 50 HELIX 83 689 98 COLOUR_TEXT_REGION 83 689 98 689 50 HELIX 105 689 117 COLOUR_TEXT_REGION 105 689 117 689 50 HELIX 123 689 136 COLOUR_TEXT_REGION 123 689 136 689 50 STRAND 61 694 69 COLOUR_TEXT_REGION 61 694 69 694 51 STRAND 73 694 79 COLOUR_TEXT_REGION 73 694 79 694 51 HELIX 10 694 21 COLOUR_TEXT_REGION 10 694 21 694 50 HELIX 24 694 42 COLOUR_TEXT_REGION 24 694 42 694 50 HELIX 47 694 57 COLOUR_TEXT_REGION 47 694 57 694 50 HELIX 84 694 98 COLOUR_TEXT_REGION 84 694 98 694 50 HELIX 105 694 118 COLOUR_TEXT_REGION 105 694 118 694 50 HELIX 122 694 136 COLOUR_TEXT_REGION 122 694 136 694 50 STRAND 67 695 67 COLOUR_TEXT_REGION 67 695 67 695 51 STRAND 74 695 75 COLOUR_TEXT_REGION 74 695 75 695 51 HELIX 10 695 21 COLOUR_TEXT_REGION 10 695 21 695 50 HELIX 25 695 42 COLOUR_TEXT_REGION 25 695 42 695 50 HELIX 49 695 66 COLOUR_TEXT_REGION 49 695 66 695 50 HELIX 82 695 99 COLOUR_TEXT_REGION 82 695 99 695 50 HELIX 105 695 117 COLOUR_TEXT_REGION 105 695 117 695 50 HELIX 125 695 135 COLOUR_TEXT_REGION 125 695 135 695 50