SILENT_MODE BLOCK_FILE jp_P6C5lOw.concise.blc MAX_NSEQ 876 MAX_INPUT_LEN 878 OUTPUT_FILE jp_P6C5lOw.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 291 865 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 866 291 875 H SPACE SUB_CHARS 1 866 291 875 E SPACE SUB_CHARS 1 866 291 875 - SPACE STRAND 62 869 66 COLOUR_TEXT_REGION 62 869 66 869 51 STRAND 76 869 83 COLOUR_TEXT_REGION 76 869 83 869 51 STRAND 91 869 95 COLOUR_TEXT_REGION 91 869 95 869 51 STRAND 143 869 149 COLOUR_TEXT_REGION 143 869 149 869 51 STRAND 172 869 177 COLOUR_TEXT_REGION 172 869 177 869 51 STRAND 189 869 193 COLOUR_TEXT_REGION 189 869 193 869 51 STRAND 240 869 243 COLOUR_TEXT_REGION 240 869 243 869 51 HELIX 8 869 14 COLOUR_TEXT_REGION 8 869 14 869 50 HELIX 19 869 31 COLOUR_TEXT_REGION 19 869 31 869 50 HELIX 42 869 55 COLOUR_TEXT_REGION 42 869 55 869 50 HELIX 120 869 134 COLOUR_TEXT_REGION 120 869 134 869 50 HELIX 158 869 164 COLOUR_TEXT_REGION 158 869 164 869 50 HELIX 200 869 211 COLOUR_TEXT_REGION 200 869 211 869 50 HELIX 230 869 235 COLOUR_TEXT_REGION 230 869 235 869 50 HELIX 269 869 287 COLOUR_TEXT_REGION 269 869 287 869 50 STRAND 61 874 65 COLOUR_TEXT_REGION 61 874 65 874 51 STRAND 75 874 83 COLOUR_TEXT_REGION 75 874 83 874 51 STRAND 91 874 95 COLOUR_TEXT_REGION 91 874 95 874 51 STRAND 143 874 148 COLOUR_TEXT_REGION 143 874 148 874 51 STRAND 172 874 178 COLOUR_TEXT_REGION 172 874 178 874 51 STRAND 189 874 193 COLOUR_TEXT_REGION 189 874 193 874 51 STRAND 240 874 242 COLOUR_TEXT_REGION 240 874 242 874 51 HELIX 10 874 14 COLOUR_TEXT_REGION 10 874 14 874 50 HELIX 19 874 30 COLOUR_TEXT_REGION 19 874 30 874 50 HELIX 42 874 55 COLOUR_TEXT_REGION 42 874 55 874 50 HELIX 120 874 134 COLOUR_TEXT_REGION 120 874 134 874 50 HELIX 156 874 163 COLOUR_TEXT_REGION 156 874 163 874 50 HELIX 200 874 211 COLOUR_TEXT_REGION 200 874 211 874 50 HELIX 231 874 235 COLOUR_TEXT_REGION 231 874 235 874 50 HELIX 269 874 287 COLOUR_TEXT_REGION 269 874 287 874 50 STRAND 62 875 68 COLOUR_TEXT_REGION 62 875 68 875 51 STRAND 76 875 82 COLOUR_TEXT_REGION 76 875 82 875 51 STRAND 91 875 96 COLOUR_TEXT_REGION 91 875 96 875 51 STRAND 114 875 116 COLOUR_TEXT_REGION 114 875 116 875 51 STRAND 143 875 150 COLOUR_TEXT_REGION 143 875 150 875 51 STRAND 172 875 176 COLOUR_TEXT_REGION 172 875 176 875 51 STRAND 189 875 194 COLOUR_TEXT_REGION 189 875 194 875 51 STRAND 240 875 244 COLOUR_TEXT_REGION 240 875 244 875 51 STRAND 255 875 255 COLOUR_TEXT_REGION 255 875 255 875 51 HELIX 8 875 15 COLOUR_TEXT_REGION 8 875 15 875 50 HELIX 19 875 31 COLOUR_TEXT_REGION 19 875 31 875 50 HELIX 43 875 56 COLOUR_TEXT_REGION 43 875 56 875 50 HELIX 121 875 135 COLOUR_TEXT_REGION 121 875 135 875 50 HELIX 159 875 165 COLOUR_TEXT_REGION 159 875 165 875 50 HELIX 200 875 211 COLOUR_TEXT_REGION 200 875 211 875 50 HELIX 230 875 235 COLOUR_TEXT_REGION 230 875 235 875 50 HELIX 269 875 287 COLOUR_TEXT_REGION 269 875 287 875 50